Gene detail

Gene detail information of Glyur000528s00024900

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G57020.1	myristoyl-CoA:protein N-myristoyltransferase
NR	XP_004513439.1	PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9LTR9\|NMT1_ARATH	Glycylpeptide N-tetradecanoyltransferase 1
trEMBL	tr\|I1MHA1\|I1MHA1_SOYBN	Glycylpeptide N-tetradecanoyltransferase {ECO:0000256\|RuleBase:RU000586}

Sequence

Transcript Sequence

>Glyur000528s00024900.1
ATGGGCGATAACAACAATAACATCAATAACAATTCTCCGTCAGCTTCTCCAAAAGCAAAACCAGATCTAGTTGATGGAGACTCGGGAACAATTCCGAGGGTCGCCGACGCCGACACCAACACCGAAACCTCGTTGGAAACCATCGTACGGAGTTTCCAAGACTCAATGTCTGTCATTGGCGGCGGCGGAAGCAAGAGGCACAAGTTCTGGGAAACCCAACCCGTTGGTCAATACAAGGAAATCGGAGACACAACCTTACCCGAAGGACCCATTGAGCCACCAACACCATTATCAGAAATCAAACAGGAACCTTACAACCTTCCAAGCGCTTATGAATGGACAACATGCGACATGGACTCAGAAGAAACATGCGACGAGGTTTATCTCCTTTTGAAGAACAACTATGTGGAGGACGATGAGAACATGTTCAGGTTCAATTACTCCAAGGAGTTTTTAATGTGGGCTTTGCGTGTTCCTGGTTATTACAGGACTTGGCACATTGGTGTTCGTGCAAAGGGTTCAAAAAAGTTAGTAGCTTTCATAACAGGTATCCCTGCAAGGATAAGGGTANGTGAAAATGTTGTGAAGATGGCTGAGATTAACTTTTTGTGTGTTCATAAGAAGCTTAGGACNAAAAGGCTTGCCCCTGTTATGATCAAGGAGGTTACAAGGAGGGTTCATTTGGAGGATATTTGGCAAGCAGCTTATACAGCTGGGGTTGTTCTCCCAACACCAATTACAACTTGTCAGTATTGGCATAGGTCTTTGAACCCAAAGAAGCTCATCGATGTTGGGTTCTCGCGGCTCGGTCCAAGGATGACGATGAGCCGGACTGTGAAGCTTTACAAGCTGCCTAACTCGACNGTTACCCCGGGTTTTAGGAAGATGGAGCTGAGGGATGTCGCCGCGGTTACAAGGCTGCTTAGGGAGTATTTGGGCCGGTTTGTCGTTGCGCCAGATTTCGATGAGGATGATGTTGAGCACTGGCTTTTGCCGCGCGAGAATGTGGTTGATAGTTACCTTGTTGAGTGCCCTGAGAGCCATGAGATAACTGATTTCTGCAGCTTCTATACGCTGCCTTCGTCGATCCTTGGGAACCAGAGTTACTCCACTTTGAAAGCTGCTTATTCTTATTACAATGTGGCTACTAAGACTCCATTGACTCAGCTGATGAACGATGCGCTTATTGTGGCGAAGCAGAAGGATTTTGATGTTTTCAATGCCTTGGATGTGATGCATAATGAGGGGTTCCTCAAGGAGCTCAAGTTTGGACCTGGGGATGGACANCTTCATTACTACTTGTACAATTATAGGATCCCTTGTGCCTTGAAACCATCTGAACTTGGGCTTGTGCTCTTGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00528	100037	101398	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006499 N-terminal protein myristoylation

molecular_function
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000528s00024900.1	PF01233.14	NMT	88	249	2.70E-76
Glyur000528s00024900.1	PF02799.10	NMT_C	263	452	3.70E-80

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.279
SRR1783600	control	7.296
SRR1783602	moderate drought stress	4.410
SRR1811619	moderate drought stress	4.068

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.936
DRR006520	Root Summer glycyrrhizin high producing strain	8.288
DRR006521	Root Winter glycyrrhizin high producing strain	4.014
DRR006522	Root Winter glycyrrhizin high producing strain	3.747
DRR006523	Root Summer glycyrrhizin low producing strain	7.923
DRR006524	Root Summer glycyrrhizin low producing strain	7.710
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.686
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.775

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.088
SRR2868004	Drought Stress (root)	16.262
SRR2967015	Control (root)	16.605

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.213
SRR9715740	Leaf	6.403
SRR9715741	Leaf	3.575
SRR9715739	Root	20.168
SRR9715742	Root	17.288
SRR9715743	Root	17.088

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	31.634
SRR8749028	MeJA induced 9h	29.638
SRR8749029	MeJA induced 9h	49.605
SRR8749030	Uninduced	17.516
SRR8749031	Uninduced	22.388
SRR8749032	Uninduced	21.201

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.427
SRR8400027	Control - Root	13.226