Gene detail

Gene detail information of Glyur000527s00032548

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G05600.1	8.00E-59	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
NR	XP_010909998.1	3.81E-102	PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Elaeis guineensis]
COG	YP_003882441.1	1.00E-08	2-Oxobutyrate oxidase [Dickeya dadantii 3937]
Swissprot	tr\|P51091\|LDOX_MALDO	8.00E-31	Leucoanthocyanidin dioxygenase
trEMBL	tr\|K7MTJ4\|K7MTJ4_SOYBN	8.00E-101	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G43142.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00527	64641	69584	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0016491 oxidoreductase activity

GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000527s00032548.1	PF14226.1	DIOX_N	60	171	6.00E-33
Glyur000527s00032548.1	PF03171.15	2OG-FeII_Oxy	165	218	2.40E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.835
SRR1783600	control	0.665
SRR1783602	moderate drought stress	1.079
SRR1811619	moderate drought stress	1.120

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.400
DRR006520	Root Summer glycyrrhizin high producing strain	0.146
DRR006521	Root Winter glycyrrhizin high producing strain	0.138
DRR006522	Root Winter glycyrrhizin high producing strain	0.010
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.137
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.356
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.301

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.403
SRR2868004	Drought Stress (root)	16.221
SRR2967015	Control (root)	13.812

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	50.500
SRR9715740	Leaf	10.162
SRR9715741	Leaf	25.462
SRR9715739	Root	2.465
SRR9715742	Root	4.555
SRR9715743	Root	3.623

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.500
SRR8749028	MeJA induced 9h	0.460
SRR8749029	MeJA induced 9h	0.067
SRR8749030	Uninduced	329.335
SRR8749031	Uninduced	52.485
SRR8749032	Uninduced	108.551

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	59.986
SRR8400027	Control - Root	2.736