Gene detail information of Glyur000525s00018824


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G15352.13.00E-20cytochrome c oxidase 17
NRXP_007152970.13.07E-32hypothetical protein PHAVU_004G175600g [Phaseolus vulgaris]
Swissprottr|Q9LJQ9|CX171_ARATH5.00E-27Cytochrome c oxidase copper chaperone 1
trEMBLtr|V7C494|V7C494_PHAVU1.00E-32Uncharacterized protein {ECO:0000313|EMBL:ESW24964.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00525130889131681-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006825  copper ion transport


cellular_component

GO:0005758  mitochondrial intermembrane space


molecular_function

GO:0005507  copper ion binding

GO:0016531  copper chaperone activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000525s00018824.1PF05051.8COX1734802.10E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.529
SRR1783600control19.944
SRR1783602moderate drought stress18.014
SRR1811619moderate drought stress17.326

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.686
DRR006520Root Summer glycyrrhizin high producing strain22.834
DRR006521Root Winter glycyrrhizin high producing strain47.467
DRR006522Root Winter glycyrrhizin high producing strain44.262
DRR006523Root Summer glycyrrhizin low producing strain21.961
DRR006524Root Summer glycyrrhizin low producing strain22.645
DRR006525Leaf Summer glycyrrhizin high producing strain25.944
DRR006526Leaf Summer glycyrrhizin high producing strain25.992

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)33.012
SRR2868004Drought Stress (root)34.344
SRR2967015Control (root)34.083

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf32.668
SRR9715740Leaf38.286
SRR9715741Leaf38.817
SRR9715739Root10.837
SRR9715742Root12.029
SRR9715743Root10.776

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h96.187
SRR8749028MeJA induced 9h103.171
SRR8749029MeJA induced 9h96.651
SRR8749030Uninduced172.738
SRR8749031Uninduced240.066
SRR8749032Uninduced156.241

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root41.188
SRR8400027Control - Root25.137

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved