Gene detail information of Glyur000525s00018823 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15353.1 | 5.00E-18 | metallothionein 3 |
| NR | KCW67342.1 | 3.94E-28 | hypothetical protein EUGRSUZ_F01127 [Eucalyptus grandis] |
| Swissprot | tr|Q96386|MT3_CARPA | 8.00E-28 | Metallothionein-like protein type 3 |
| trEMBL | tr|A0A059BM92|A0A059BM92_EUCGR | 1.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:KCW67342.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00525 | 125349 | 127180 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 63.199 |
| SRR1783600 | control | 62.038 |
| SRR1783602 | moderate drought stress | 128.277 |
| SRR1811619 | moderate drought stress | 123.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 368.026 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 361.943 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.661 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.823 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 532.603 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 525.860 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 355.665 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 352.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 303.020 |
| SRR2868004 | Drought Stress (root) | 454.439 |
| SRR2967015 | Control (root) | 551.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1159.748 |
| SRR9715740 | Leaf | 2131.855 |
| SRR9715741 | Leaf | 1600.184 |
| SRR9715739 | Root | 651.140 |
| SRR9715742 | Root | 1057.721 |
| SRR9715743 | Root | 964.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.067 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.058 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 208.450 |
| SRR8400027 | Control - Root | 545.119 |