Gene detail information of Glyur000525s00018812 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62050.1 | 2.00E-08 | Ankyrin repeat family protein |
| NR | XP_008358755.1 | 1.84E-10 | PREDICTED: ankyrin repeat domain-containing protein 13C-like [Malus domestica] |
| trEMBL | tr|F6H7L6|F6H7L6_VITVI | 1.00E-10 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB48211.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00525 | 83596 | 85611 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.730 |
| SRR1783600 | control | 3.613 |
| SRR1783602 | moderate drought stress | 2.464 |
| SRR1811619 | moderate drought stress | 2.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.600 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.358 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.266 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.976 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.861 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.437 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.870 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.002 |
| SRR9715741 | Leaf | 0.152 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.020 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.070 |
| SRR8749030 | Uninduced | 0.001 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |