Gene detail information of Glyur000524s00019140 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12012.1 | 2.00E-16 | conserved peptide upstream open reading frame 20 |
| NR | XP_006604399.1 | 1.34E-29 | PREDICTED: uncharacterized protein LOC102664266 isoform X1 [Glycine max] |
| trEMBL | tr|C6T1K7|C6T1K7_SOYBN | 5.00E-30 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G33250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00524 | 133315 | 134142 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.460 |
| SRR1783600 | control | 9.726 |
| SRR1783602 | moderate drought stress | 6.673 |
| SRR1811619 | moderate drought stress | 9.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.434 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.328 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.634 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.521 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.993 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.586 |
| SRR2868004 | Drought Stress (root) | 17.512 |
| SRR2967015 | Control (root) | 18.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.464 |
| SRR9715740 | Leaf | 8.619 |
| SRR9715741 | Leaf | 11.118 |
| SRR9715739 | Root | 0.349 |
| SRR9715742 | Root | 8.388 |
| SRR9715743 | Root | 7.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.079 |
| SRR8749028 | MeJA induced 9h | 17.043 |
| SRR8749029 | MeJA induced 9h | 3.435 |
| SRR8749030 | Uninduced | 2.908 |
| SRR8749031 | Uninduced | 4.714 |
| SRR8749032 | Uninduced | 0.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.771 |
| SRR8400027 | Control - Root | 22.141 |