Gene detail information of Glyur000524s00019130 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41950.1 | 6.00E-56 | |
| NR | AFK38548.1 | 8.47E-131 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SE56|I3SE56_LOTJA | 3.00E-131 | Uncharacterized protein {ECO:0000313|EMBL:AFK38548.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00524 | 77772 | 79860 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.305 |
| SRR1783600 | control | 26.517 |
| SRR1783602 | moderate drought stress | 16.644 |
| SRR1811619 | moderate drought stress | 16.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.600 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.608 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.281 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.248 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.318 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.484 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.821 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.850 |
| SRR2868004 | Drought Stress (root) | 13.281 |
| SRR2967015 | Control (root) | 10.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.334 |
| SRR9715740 | Leaf | 56.737 |
| SRR9715741 | Leaf | 46.141 |
| SRR9715739 | Root | 15.784 |
| SRR9715742 | Root | 16.252 |
| SRR9715743 | Root | 13.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.057 |
| SRR8749028 | MeJA induced 9h | 2.076 |
| SRR8749029 | MeJA induced 9h | 2.073 |
| SRR8749030 | Uninduced | 1.483 |
| SRR8749031 | Uninduced | 0.220 |
| SRR8749032 | Uninduced | 0.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.225 |
| SRR8400027 | Control - Root | 29.463 |