Gene detail

Gene detail information of Glyur000524s00019118

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G12050.1	2.00E-129	Aha1 domain-containing protein
NR	XP_004493603.1	0	PREDICTED: activator of 90 kDa heat shock protein ATPase homolog [Cicer arietinum]
COG	YP_592950.1	4.00E-08	hypothetical protein Acid345_3876 [Candidatus Koribacter versatilis Ellin345]
trEMBL	tr\|I1N9A4\|I1N9A4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G33140.1}

Sequence

Transcript Sequence

>Glyur000524s00019118.1
ATGGCGAAATACGGCGAGGGAGACAAACGGTGGATCGTGGAGGAGAGACCAGACGGAACCAACGTCCACAACTGGCACTGGTCCGAAACCAACTGTCTAGAATGGTCTAGAACCTTCTTCACAACCCTCCTCTCCAACCTCGTTATCCTTGACGGCGAGGGCAGCCTCTTCATCAAAACCACCTCGCTCAAAAGCCTCGAAGGCGAGGCCTACGTCAACATCCGCAAGGGAAAAATCATCCCAGGCTACGAGATCAGCGTCACCCTCGATTGGGAAGGCGAGGCCAAAGACTCAGAGGGAAATTCCCTTCTCAAGGTTAACGGCACCGTCGAAATCCCTTACATCTCCGACGAGAACGCCGACGAGGACCNCGAACTCAGGGTCACCGTCAACGACGAGGNACCAATCGGGAAGAGGATCAAGGACGCAATGGTTTCCAAGGGGAAGCCATTGATATTGGAGAAAGTGAAGGTCTGGGTGCAGAGCATGGCCAAAGGAGGTCCNGTTAAAGAGGAATTGGACACTAAGAAGCCCTCTCCTTCTCCGTCGGCGCACCCGCAGAAGCAGAATCACGCGGCTGTGACTGCGGCGGCGGCGACAGCGACAGCGAAGGAGGGTTCGGCGGTGGCGGCGAAGAAGAAGGAGAAGGAGAGCAAAAAGGGGAGGAAGAGTATTGTGATGAGTGAGAGGTTCAATTGCAGGGCGAGGGATTTGTATGAGATATTGATGGATGAGAATAGGTGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAGTAAGGAGGTTGGTGGCGAGTTCAGCATTTTTGATGGGTCGGTTACCGGAACTAATTTGGAGTTGCAGGAAGCTAAATTGATTGTGAGGCTTGTGTTTGAGGAGCCTGAACCGGGAGTTACTGTGGTTAAGCTGACGCATACTGATGTGCCTGAAGAAGATAGGTATGGGAATGCCACTGTGGTGGAGAACACGGAGAGGGGATGGCGGGATCTTATTTTCCAAAGGATACGTGCTGTTTTTGGTTTTGGAATTTGAGATTTTTCATCATATGTAGTCTTTCCCTGCGTTGTAGAATTTTTTGCGGATTTTGATATTCACAAGGAAAAATTAATGGATTGACATTGGAATTTGACAATGCTTCCTTAGTGCTACGTTTTCTTCAATGCATCTTCGTCTGTGCAATATAACATGCTTATGTCTAGTTTGAAACTTTGGATG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00524	25343	26916	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006950 response to stress

molecular_function

GO:0001671 ATPase activator activity

GO:0051087 chaperone binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000524s00019118.1	PF09229.6	Aha1_N	29	164	4.00E-34
Glyur000524s00019118.1	PF08327.6	AHSA1	236	339	6.10E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.191
SRR1783600	control	16.149
SRR1783602	moderate drought stress	10.700
SRR1811619	moderate drought stress	10.907

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	47.033
DRR006520	Root Summer glycyrrhizin high producing strain	45.253
DRR006521	Root Winter glycyrrhizin high producing strain	15.401
DRR006522	Root Winter glycyrrhizin high producing strain	15.309
DRR006523	Root Summer glycyrrhizin low producing strain	15.961
DRR006524	Root Summer glycyrrhizin low producing strain	16.240
DRR006525	Leaf Summer glycyrrhizin high producing strain	22.699
DRR006526	Leaf Summer glycyrrhizin high producing strain	22.913

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	52.874
SRR2868004	Drought Stress (root)	48.545
SRR2967015	Control (root)	40.792

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	49.981
SRR9715740	Leaf	62.858
SRR9715741	Leaf	63.402
SRR9715739	Root	26.618
SRR9715742	Root	33.719
SRR9715743	Root	30.956

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	32.730
SRR8749028	MeJA induced 9h	20.269
SRR8749029	MeJA induced 9h	24.541
SRR8749030	Uninduced	14.969
SRR8749031	Uninduced	10.287
SRR8749032	Uninduced	22.444

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	52.699
SRR8400027	Control - Root	48.503