Gene detail information of Glyur000524s00019114 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06700.1 | 0 | Plant protein of unknown function (DUF828) |
| NR | XP_004493599.1 | 0 | PREDICTED: uncharacterized protein LOC101511851 [Cicer arietinum] |
| Swissprot | tr|Q9FG35|TBR_ARATH | 0 | Protein trichome birefringence |
| trEMBL | tr|I1N9A1|I1N9A1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G33110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00524 | 14718 | 18158 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000524s00019114.1 | PF14416.1 | PMR5N | 270 | 320 | 4.40E-22 |
| Glyur000524s00019114.1 | PF13839.1 | PC-Esterase | 321 | 607 | 6.40E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.432 |
| SRR1783600 | control | 26.634 |
| SRR1783602 | moderate drought stress | 18.307 |
| SRR1811619 | moderate drought stress | 18.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.427 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.257 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.654 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 48.464 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.035 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.101 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.905 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.507 |
| SRR2868004 | Drought Stress (root) | 11.682 |
| SRR2967015 | Control (root) | 12.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.848 |
| SRR9715740 | Leaf | 15.417 |
| SRR9715741 | Leaf | 13.572 |
| SRR9715739 | Root | 7.441 |
| SRR9715742 | Root | 31.899 |
| SRR9715743 | Root | 26.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.142 |
| SRR8749028 | MeJA induced 9h | 5.701 |
| SRR8749029 | MeJA induced 9h | 1.671 |
| SRR8749030 | Uninduced | 1.197 |
| SRR8749031 | Uninduced | 0.046 |
| SRR8749032 | Uninduced | 0.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.811 |
| SRR8400027 | Control - Root | 21.395 |