Gene detail information of Glyur000523s00021980 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49000.1 | 7.00E-17 | |
| NR | XP_004508579.1 | 2.38E-63 | PREDICTED: uncharacterized protein LOC101507638 [Cicer arietinum] |
| trEMBL | tr|G7JT03|G7JT03_MEDTR | 3.00E-61 | Transmembrane protein, putative {ECO:0000313|EMBL:AES91285.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00523 | 143905 | 144366 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.964 |
| SRR1783600 | control | 2.475 |
| SRR1783602 | moderate drought stress | 2.475 |
| SRR1811619 | moderate drought stress | 2.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.670 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.196 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.639 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.921 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.994 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.142 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 87.269 |
| SRR2868004 | Drought Stress (root) | 130.936 |
| SRR2967015 | Control (root) | 135.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.989 |
| SRR9715740 | Leaf | 10.498 |
| SRR9715741 | Leaf | 18.497 |
| SRR9715739 | Root | 22.057 |
| SRR9715742 | Root | 40.156 |
| SRR9715743 | Root | 38.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 116.098 |
| SRR8749028 | MeJA induced 9h | 131.587 |
| SRR8749029 | MeJA induced 9h | 72.700 |
| SRR8749030 | Uninduced | 172.582 |
| SRR8749031 | Uninduced | 66.030 |
| SRR8749032 | Uninduced | 64.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.599 |
| SRR8400027 | Control - Root | 18.666 |