Gene detail information of Glyur000523s00021978 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68795.1 | 1.00E-09 | CLAVATA3/ESR-RELATED 12 |
| NR | XP_004508578.1 | 6.10E-33 | PREDICTED: protein FON2 SPARE1-like [Cicer arietinum] |
| Swissprot | tr|Q6NMF0|CLE13_ARATH | 4.00E-18 | CLE13p (Precursor) |
| trEMBL | tr|I3T3H1|I3T3H1_LOTJA | 5.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:AFK47063.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00523 | 135066 | 135398 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.729 |
| SRR1783600 | control | 7.030 |
| SRR1783602 | moderate drought stress | 6.139 |
| SRR1811619 | moderate drought stress | 6.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.277 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.686 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.658 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.329 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.217 |
| SRR2868004 | Drought Stress (root) | 33.538 |
| SRR2967015 | Control (root) | 26.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.312 |
| SRR9715740 | Leaf | 2.332 |
| SRR9715741 | Leaf | 4.559 |
| SRR9715739 | Root | 11.533 |
| SRR9715742 | Root | 3.689 |
| SRR9715743 | Root | 4.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.582 |
| SRR8749028 | MeJA induced 9h | 39.528 |
| SRR8749029 | MeJA induced 9h | 57.477 |
| SRR8749030 | Uninduced | 46.541 |
| SRR8749031 | Uninduced | 58.354 |
| SRR8749032 | Uninduced | 30.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.783 |
| SRR8400027 | Control - Root | 13.106 |