Gene detail information of Glyur000522s00031195 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57490.1 | 8.00E-04 | voltage dependent anion channel 4 |
| NR | AFK40966.1 | 6.61E-08 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SL24|I3SL24_LOTJA | 2.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:AFK40966.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00522 | 24732 | 26704 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.396 |
| SRR1783600 | control | 0.487 |
| SRR1783602 | moderate drought stress | 0.700 |
| SRR1811619 | moderate drought stress | 0.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.372 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.254 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.394 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.210 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.507 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.121 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.148 |
| SRR2868004 | Drought Stress (root) | 5.109 |
| SRR2967015 | Control (root) | 3.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.582 |
| SRR9715740 | Leaf | 1.004 |
| SRR9715741 | Leaf | 0.638 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.136 |
| SRR9715743 | Root | 0.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.018 |
| SRR8749028 | MeJA induced 9h | 2.743 |
| SRR8749029 | MeJA induced 9h | 1.690 |
| SRR8749030 | Uninduced | 1.557 |
| SRR8749031 | Uninduced | 2.322 |
| SRR8749032 | Uninduced | 1.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.067 |
| SRR8400027 | Control - Root | 3.502 |