Gene detail

Gene detail information of Glyur000521s00021495

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G30170.1	2.00E-101	Protein phosphatase 2C family protein
NR	XP_004500319.1	0	PREDICTED: probable protein phosphatase 2C 26-like isoform X2 [Cicer arietinum]
Swissprot	tr\|O64730\|P2C26_ARATH	6.00E-132	Probable protein phosphatase 2C 26
trEMBL	tr\|I1MZV2\|I1MZV2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G06480.1}

Sequence

Transcript Sequence

>Glyur000521s00021495.1
ATAAACGTTGATTTTCATGGCAGTGTGTGAAGGATAATAGAGGGTGTTGAAGTTGAAGCGGGAAGGAATGGCAATTCCCATATTGAGGGCTGCAATGATTTCTCGTTCTCAATCTCAACTCCTCATTCATTCCATATCAGCTACTGATGAAACTGCCAAGAGGAGGAAAAGGGTGGTGCTCTCTTCTTCAGAACTTAACCCTGTAATTAGGTCAGAGGTATCATTTTCTGTTGGGACTTGCCTTATTCCACATCCAAAAAAGGTTGACAGAGGTGGGGAAGATGCTTTCTTTGTGANCAACTATAATGGGGGAGTTATTGCTGTTGCTGATGGTGTCTCTGGTTGGGCTGAAGAGGACGTGGACCCTTCATTGTTCCCACGTGAATTGCTGGCTAATGCTTCCAATTTTGTAGGAGATGAGGAGGTGAACAATGATCCTCAGATTCTTATAAGGAAAGCACATGCTGCTACTTCCTCTACNGGCTCAGCTACTGTCATCATTGCTATGCTGGAAAAGAATGGGAATCTGAAGGTTGCCAATGTTGGAGATTGTGGATTGAGAGTTATCCGTAATGGTCGTGTAATGTTTTCCACTTCTCCACAAGAACATTACTTTGACTGTCCATTCCAACTGAGCTCTGAGAGGGTTGGCCAAACGTACCTTGATGCAGTGGTAAGCGATGTGGAGTTGATAGAAGGAGACACAATTGTCATGGGATCTGATGGNCTTTTTGATAATGTTTTTGACCATGAAATTGTTTCAACCATTGCTAGATACAAAAATGTTTCCGAGGCTGCAAAGGCATTAGCTAACTTGGCAAGCAGTCATGCAATGGATTCAAATTTTGACTCTCCCTATTCGTTGGAGGCCAGGTCCAAGGGTTTTGAGGCACCCTTGTGGAAGAAAATTCTTGGNATGAAGCTTACAGGTGGAAAGCTTGATGATATTACTGTAATTGTTGGTCAGGTTGTAAGTTCATGAGATTTGCTAATCTCAATAAATTGATTTATATGCTTNAAGAAAACAAGGTCCTGATTGCTGAGATCACCAGAGTAGGAGTTACCTTAAGTATACTGTGGCCACTAAACAAGCATTTATTCATGGAAGTACTCTTGCTTTGCCATGAAGCCTGTAGTTCTTCATGCATTGAGAAAAGAAGCTGTCTGTGATATTCATTGAAAGTTAGTTTTTTTTTTTTGGTTTATGAAATGCTGTGCATAAAAGTTGTCTTTAATACGGTGGAGAATTATGATGGTGAGTAGAAAAACAGAACCAGTAGAAACAAGCAAAAACTTGTAACGTTACAATGATACATTACCAGAGAACACTTGAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00521	139551	143051	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0003824 catalytic activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000521s00021495.1	PF07228.7	SpoIIE	96	300	4.70E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.085
SRR1783600	control	2.072
SRR1783602	moderate drought stress	4.348
SRR1811619	moderate drought stress	4.015

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.438
DRR006520	Root Summer glycyrrhizin high producing strain	5.204
DRR006521	Root Winter glycyrrhizin high producing strain	8.627
DRR006522	Root Winter glycyrrhizin high producing strain	8.543
DRR006523	Root Summer glycyrrhizin low producing strain	6.866
DRR006524	Root Summer glycyrrhizin low producing strain	6.407
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.567
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.610

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.849
SRR2868004	Drought Stress (root)	9.696
SRR2967015	Control (root)	14.586

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.293
SRR9715740	Leaf	33.030
SRR9715741	Leaf	17.241
SRR9715739	Root	0.672
SRR9715742	Root	1.903
SRR9715743	Root	1.685

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.551
SRR8749028	MeJA induced 9h	7.990
SRR8749029	MeJA induced 9h	3.122
SRR8749030	Uninduced	2.973
SRR8749031	Uninduced	1.237
SRR8749032	Uninduced	2.374

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.288
SRR8400027	Control - Root	13.181