Gene detail information of Glyur000521s00021490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58430.1 | 3.00E-102 | exocyst subunit exo70 family protein B1 |
| NR | XP_004500325.1 | 2.49E-146 | PREDICTED: uncharacterized protein LOC101491679 [Cicer arietinum] |
| Swissprot | tr|Q9FGH9|E70B1_ARATH | 8.00E-126 | Exocyst complex component EXO70B1 |
| trEMBL | tr|A0A061H0E1|A0A061H0E1_THECC | 2.00E-131 | Exocyst subunit exo70 family protein B1 {ECO:0000313|EMBL:EOY34624.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00521 | 100379 | 101335 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.627 |
| SRR1783600 | control | 1.465 |
| SRR1783602 | moderate drought stress | 2.500 |
| SRR1811619 | moderate drought stress | 2.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.442 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.081 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.755 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.341 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.651 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.113 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.221 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.452 |
| SRR2868004 | Drought Stress (root) | 1.482 |
| SRR2967015 | Control (root) | 1.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.717 |
| SRR9715740 | Leaf | 16.734 |
| SRR9715741 | Leaf | 14.930 |
| SRR9715739 | Root | 23.810 |
| SRR9715742 | Root | 53.666 |
| SRR9715743 | Root | 42.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.589 |
| SRR8400027 | Control - Root | 21.732 |