Gene detail information of Glyur000521s00021488 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58430.1 | 5.00E-32 | exocyst subunit exo70 family protein B1 |
| NR | AES69530.2 | 2.24E-47 | exocyst subunit exo70 family protein [Medicago truncatula] |
| Swissprot | tr|Q9FGH9|E70B1_ARATH | 4.00E-37 | Exocyst complex component EXO70B1 |
| trEMBL | tr|G7IWW7|G7IWW7_MEDTR | 8.00E-48 | Exocyst subunit exo70 family protein {ECO:0000313|EMBL:AES69530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00521 | 99413 | 99691 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000521s00021488.1 | PF03081.10 | Exo70 | 2 | 80 | 4.00E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.606 |
| SRR1783600 | control | 4.091 |
| SRR1783602 | moderate drought stress | 5.132 |
| SRR1811619 | moderate drought stress | 5.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.424 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 60.711 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.297 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.433 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.863 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.305 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.266 |
| SRR2868004 | Drought Stress (root) | 2.772 |
| SRR2967015 | Control (root) | 2.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.911 |
| SRR9715740 | Leaf | 42.145 |
| SRR9715741 | Leaf | 32.826 |
| SRR9715739 | Root | 39.163 |
| SRR9715742 | Root | 66.700 |
| SRR9715743 | Root | 67.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.645 |
| SRR8400027 | Control - Root | 35.545 |