Gene detail information of Glyur000521s00021487 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06980.1 | 2.00E-41 | |
| NR | XP_003599280.1 | 3.50E-71 | hypothetical protein MTR_3g031140 [Medicago truncatula] |
| trEMBL | tr|G7IWW8|G7IWW8_MEDTR | 1.00E-71 | Uncharacterized protein {ECO:0000313|EMBL:AFK48429.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00521 | 86193 | 86726 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000521s00021487.1 | PF14009.1 | DUF4228 | 1 | 176 | 6.60E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.639 |
| SRR1783600 | control | 2.569 |
| SRR1783602 | moderate drought stress | 3.027 |
| SRR1811619 | moderate drought stress | 2.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.203 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.201 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.149 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.207 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.548 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.901 |
| SRR2868004 | Drought Stress (root) | 8.999 |
| SRR2967015 | Control (root) | 6.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.482 |
| SRR9715740 | Leaf | 3.127 |
| SRR9715741 | Leaf | 1.596 |
| SRR9715739 | Root | 3.459 |
| SRR9715742 | Root | 1.384 |
| SRR9715743 | Root | 1.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.266 |
| SRR8749028 | MeJA induced 9h | 0.241 |
| SRR8749029 | MeJA induced 9h | 0.111 |
| SRR8749030 | Uninduced | 0.787 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.283 |
| SRR8400027 | Control - Root | 0.707 |