Gene detail information of Glyur000521s00021484 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01710.1 | 6.00E-166 | methyltransferases |
| NR | XP_004500447.1 | 0 | PREDICTED: uncharacterized protein LOC101506752 [Cicer arietinum] |
| trEMBL | tr|K7LR12|K7LR12_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G29710.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00521 | 71534 | 73015 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000521s00021484.1 | PF05050.7 | Methyltransf_21 | 301 | 470 | 1.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.486 |
| SRR1783600 | control | 1.442 |
| SRR1783602 | moderate drought stress | 1.737 |
| SRR1811619 | moderate drought stress | 1.718 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.674 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.717 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.824 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.916 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.432 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.319 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.217 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.094 |
| SRR2868004 | Drought Stress (root) | 5.521 |
| SRR2967015 | Control (root) | 6.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.823 |
| SRR9715740 | Leaf | 3.160 |
| SRR9715741 | Leaf | 5.765 |
| SRR9715739 | Root | 7.455 |
| SRR9715742 | Root | 6.422 |
| SRR9715743 | Root | 6.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.613 |
| SRR8749028 | MeJA induced 9h | 31.995 |
| SRR8749029 | MeJA induced 9h | 14.779 |
| SRR8749030 | Uninduced | 6.415 |
| SRR8749031 | Uninduced | 9.013 |
| SRR8749032 | Uninduced | 13.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.641 |
| SRR8400027 | Control - Root | 4.702 |