Gene detail information of Glyur000521s00021483 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38470.1 | 2.00E-25 | WRKY DNA-binding protein 33 |
| NR | KHN02122.1 | 1.68E-93 | Putative WRKY transcription factor 33 [Glycine soja] |
| Swissprot | tr|Q9C5T3|WRK26_ARATH | 6.00E-33 | Probable WRKY transcription factor 26 |
| trEMBL | tr|K7MQ56|K7MQ56_SOYBN | 6.00E-94 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G06360.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00521 | 65769 | 67987 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000521s00021483.1 | PF03106.10 | WRKY | 116 | 167 | 1.60E-26 |
| Glyur000521s00021483.1 | PF03106.10 | WRKY | 213 | 237 | 3.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.730 |
| SRR1783600 | control | 10.447 |
| SRR1783602 | moderate drought stress | 14.493 |
| SRR1811619 | moderate drought stress | 14.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.713 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.226 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.181 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.412 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.543 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 47.816 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.054 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.751 |
| SRR2868004 | Drought Stress (root) | 83.194 |
| SRR2967015 | Control (root) | 72.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 53.504 |
| SRR9715740 | Leaf | 33.053 |
| SRR9715741 | Leaf | 76.452 |
| SRR9715739 | Root | 12.990 |
| SRR9715742 | Root | 19.870 |
| SRR9715743 | Root | 17.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 130.575 |
| SRR8749028 | MeJA induced 9h | 440.806 |
| SRR8749029 | MeJA induced 9h | 297.182 |
| SRR8749030 | Uninduced | 314.826 |
| SRR8749031 | Uninduced | 393.061 |
| SRR8749032 | Uninduced | 236.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.864 |
| SRR8400027 | Control - Root | 42.468 |