Gene detail information of Glyur000521s00021481 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10985.1 | 7.00E-16 | senescence associated gene 20 |
| NR | XP_006602069.1 | 2.61E-66 | PREDICTED: uncharacterized protein LOC102664858 [Glycine max] |
| Swissprot | tr|P20144|WUN1_SOLTU | 3.00E-18 | Wound-induced protein 1 |
| trEMBL | tr|I1MZU1|I1MZU1_SOYBN | 1.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G06340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00521 | 53984 | 54469 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000521s00021481.1 | PF07107.6 | WI12 | 74 | 161 | 8.40E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.075 |
| SRR1783600 | control | 0.076 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.617 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.290 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.730 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.554 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.674 |
| SRR2868004 | Drought Stress (root) | 29.436 |
| SRR2967015 | Control (root) | 45.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.718 |
| SRR9715742 | Root | 0.946 |
| SRR9715743 | Root | 0.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.545 |
| SRR8400027 | Control - Root | 0.980 |