Gene detail information of Glyur000520s00025573 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67910.2 | 8.00E-14 | |
| NR | XP_003628939.1 | 4.42E-35 | PGPS/D10 [Medicago truncatula] |
| trEMBL | tr|G7LJB9|G7LJB9_MEDTR | 2.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:AET03415.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00520 | 105106 | 105426 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.653 |
| SRR1783600 | control | 1.477 |
| SRR1783602 | moderate drought stress | 4.373 |
| SRR1811619 | moderate drought stress | 4.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.489 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.732 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.695 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.656 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.551 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.002 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.739 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.866 |
| SRR2868004 | Drought Stress (root) | 8.121 |
| SRR2967015 | Control (root) | 8.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.769 |
| SRR9715740 | Leaf | 3.079 |
| SRR9715741 | Leaf | 1.717 |
| SRR9715739 | Root | 1.893 |
| SRR9715742 | Root | 8.192 |
| SRR9715743 | Root | 7.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.185 |
| SRR8749028 | MeJA induced 9h | 0.443 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.541 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.251 |
| SRR8400027 | Control - Root | 5.281 |