Gene detail information of Glyur000520s00025568 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007140841.1 | 5.39E-20 | hypothetical protein PHAVU_008G146100g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7B5I5|V7B5I5_PHAVU | 2.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:ESW12835.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00520 | 54102 | 54630 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.509 |
| SRR1783600 | control | 6.924 |
| SRR1783602 | moderate drought stress | 11.852 |
| SRR1811619 | moderate drought stress | 13.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.612 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.801 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.599 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.403 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.908 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.112 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.773 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.486 |
| SRR2868004 | Drought Stress (root) | 9.627 |
| SRR2967015 | Control (root) | 10.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.044 |
| SRR9715740 | Leaf | 2.494 |
| SRR9715741 | Leaf | 2.778 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.451 |
| SRR9715743 | Root | 0.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.459 |
| SRR8749028 | MeJA induced 9h | 18.434 |
| SRR8749029 | MeJA induced 9h | 3.393 |
| SRR8749030 | Uninduced | 3.547 |
| SRR8749031 | Uninduced | 4.126 |
| SRR8749032 | Uninduced | 1.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.518 |
| SRR8400027 | Control - Root | 10.561 |