Gene detail information of Glyur000519s00019109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20740.1 | 2.00E-33 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | KEH32420.1 | 9.14E-87 | plant invertase/pectin methylesterase inhibitor [Medicago truncatula] |
| Swissprot | tr|P17407|21KD_DAUCA | 2.00E-23 | 21 kDa protein (Precursor) |
| trEMBL | tr|A0A072V2U1|A0A072V2U1_MEDTR | 3.00E-87 | Plant invertase/pectin methylesterase inhibitor {ECO:0000313|EMBL:KEH32420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00519 | 137599 | 138240 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000519s00019109.1 | PF04043.10 | PMEI | 32 | 195 | 2.70E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.057 |
| SRR1783600 | control | 1.842 |
| SRR1783602 | moderate drought stress | 2.634 |
| SRR1811619 | moderate drought stress | 2.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.436 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.432 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.622 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.650 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.679 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.689 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.145 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.097 |
| SRR2868004 | Drought Stress (root) | 22.436 |
| SRR2967015 | Control (root) | 41.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.565 |
| SRR9715740 | Leaf | 0.099 |
| SRR9715741 | Leaf | 0.456 |
| SRR9715739 | Root | 3.285 |
| SRR9715742 | Root | 6.923 |
| SRR9715743 | Root | 3.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.894 |
| SRR8749028 | MeJA induced 9h | 1.305 |
| SRR8749029 | MeJA induced 9h | 0.593 |
| SRR8749030 | Uninduced | 1.362 |
| SRR8749031 | Uninduced | 0.108 |
| SRR8749032 | Uninduced | 0.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.118 |
| SRR8400027 | Control - Root | 7.391 |