Gene detail information of Glyur000519s00019108 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20790.1 | 5.00E-11 | |
| NR | XP_003609966.1 | 2.15E-46 | hypothetical protein MTR_4g124850 [Medicago truncatula] |
| trEMBL | tr|G7JS65|G7JS65_MEDTR | 8.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:AFK44829.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00519 | 131040 | 131558 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.101 |
| SRR1783600 | control | 5.607 |
| SRR1783602 | moderate drought stress | 3.250 |
| SRR1811619 | moderate drought stress | 2.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.811 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.120 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.430 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.296 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.091 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.845 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.624 |
| SRR2868004 | Drought Stress (root) | 39.130 |
| SRR2967015 | Control (root) | 46.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.673 |
| SRR9715740 | Leaf | 0.990 |
| SRR9715741 | Leaf | 3.327 |
| SRR9715739 | Root | 10.092 |
| SRR9715742 | Root | 4.665 |
| SRR9715743 | Root | 8.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.462 |
| SRR8749028 | MeJA induced 9h | 0.090 |
| SRR8749029 | MeJA induced 9h | 0.218 |
| SRR8749030 | Uninduced | 0.712 |
| SRR8749031 | Uninduced | 0.110 |
| SRR8749032 | Uninduced | 0.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.013 |
| SRR8400027 | Control - Root | 62.339 |