Gene detail information of Glyur000519s00019102 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G43120.1 | 8.00E-51 | SAUR-like auxin-responsive protein family |
| NR | XP_003551054.1 | 6.73E-92 | PREDICTED: uncharacterized protein LOC100795275 [Glycine max] |
| Swissprot | tr|P32295|ARG7_VIGRR | 2.00E-19 | Indole-3-acetic acid-induced protein ARG7 |
| trEMBL | tr|I1MS44|I1MS44_SOYBN | 3.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00519 | 92482 | 93828 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000519s00019102.1 | PF02519.9 | Auxin_inducible | 71 | 146 | 3.80E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.289 |
| SRR1783600 | control | 4.257 |
| SRR1783602 | moderate drought stress | 1.953 |
| SRR1811619 | moderate drought stress | 1.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.374 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.595 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.563 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.025 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.068 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.568 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.537 |
| SRR2868004 | Drought Stress (root) | 8.778 |
| SRR2967015 | Control (root) | 8.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.278 |
| SRR9715740 | Leaf | 0.733 |
| SRR9715741 | Leaf | 0.143 |
| SRR9715739 | Root | 0.990 |
| SRR9715742 | Root | 0.422 |
| SRR9715743 | Root | 0.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.059 |
| SRR8749028 | MeJA induced 9h | 0.756 |
| SRR8749029 | MeJA induced 9h | 0.180 |
| SRR8749030 | Uninduced | 1.397 |
| SRR8749031 | Uninduced | 0.123 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.917 |
| SRR8400027 | Control - Root | 3.016 |