Gene detail information of Glyur000519s00019094 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03140.1 | 0 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004508032.1 | 0 | PREDICTED: uncharacterized protein LOC101493992 [Cicer arietinum] |
| COG | YP_007110369.1 | 3.00E-24 | abortive infection protein [Geitlerinema sp. PCC 7407] |
| Swissprot | tr|Q40863|EMB8_PICGL | 1.00E-38 | Embryogenesis-associated protein EMB8 |
| trEMBL | tr|I1MS42|I1MS42_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00519 | 46406 | 61967 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.801 |
| SRR1783600 | control | 40.965 |
| SRR1783602 | moderate drought stress | 26.318 |
| SRR1811619 | moderate drought stress | 26.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.043 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.797 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.136 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.216 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.505 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.739 |
| SRR2868004 | Drought Stress (root) | 12.797 |
| SRR2967015 | Control (root) | 11.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.769 |
| SRR9715740 | Leaf | 5.168 |
| SRR9715741 | Leaf | 4.004 |
| SRR9715739 | Root | 3.780 |
| SRR9715742 | Root | 16.420 |
| SRR9715743 | Root | 14.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.567 |
| SRR8749028 | MeJA induced 9h | 3.339 |
| SRR8749029 | MeJA induced 9h | 1.106 |
| SRR8749030 | Uninduced | 1.987 |
| SRR8749031 | Uninduced | 1.247 |
| SRR8749032 | Uninduced | 0.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.362 |
| SRR8400027 | Control - Root | 41.899 |