Gene detail

Gene detail information of Glyur000519s00019087

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G43220.1	Phosphoinositide phosphatase family protein
NR	XP_004508039.1	PREDICTED: phosphoinositide phosphatase SAC3-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q7XZU1\|SAC4_ARATH	Phosphoinositide phosphatase SAC4
trEMBL	tr\|G7JS42\|G7JS42_MEDTR	Phosphoinositide phosphatase SAC4 {ECO:0000313\|EMBL:AES92140.1}

Sequence

Transcript Sequence

>Glyur000519s00019087.1
TGTTCCTACACCCGTGGTTCCAACCTTTTTGTTCTCGAACCTCCCAAATCTTCTTTCCCCCTTTCAATCTTCACCCAGTTTCTGTGCTCGATCTTCTCCTCGTATCTTCTCCCCTTCCATGTAAAGATTCCATTTTCTAAATACCCACATGTCGTGTTTCTCTGTTCGCGTGTAGCCATATATTATTCCATTCAAAAGAAAAATCGGAAATTTTCGTTGCGGGGTGGCGAATTTTCGATCTGGGTGTGTCGAAGCTTGAGTGAGGATAAGTGGGTCGTTGTTGGTTATAGCAGCAGGGGCGGTGGCAGTGATGGTGGTGGCGGTTCTGGTCGGAGAAGGTGGTGGAGGAGCTGAAACGATGAAGAAATATCAATTGTTTTGAGAAATAATGCTGTATCTGAAGCAGCCTAGAGTTTTGGATATGGGTTTGTATTTTTGGATTGCGAGCGTTTTGCATTGTGATGATTCTGAATTTTGGTAATTTGGCACACTTTGCATGCCATTTTGGTACTTTCCCTGAGCCTGAGGCTCGGGGGATCTGAATTATCAGAAACAAAAAAGTCATGGCGTCTTCAGAGAATGAACCTTCTCACTCTCCTTCTGCCTCTGATGAAACACCTCTTCCTCCTCCTTCCCATGTCTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATATTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCTGAACTAAATGTGAGTGAAGATTCCACCACATATACAGAACGTGAATGTTCTGATCTTTTGAGGCGGATACATGAGGGAAACAAGTCCACAGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTACTTATCACGAAAAGAAGGCAAATTGGTGCAATATGTGGTCATACAGTATATGCTGTCTCAAAGACANAGATGATTCCATTGCCAAATTCTTCTGTTCGGTCTAACATCATCAATTCTAAAACTGAAAACAGGTACAAGAAGCTTCTATGCACAGTTGACCTCACGAAGGACTTCTTTTTCAGCTACTCATACCACATTATGCGTAGTCTTCAAAGGAACATGTGTGATAACGAGACAGGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTCTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTTTATGGCTTCTTTAAACAGGACACACTTACAATATCTGGACGGGAGTTCATACTTACGCTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTCAATGAGAAGGGCAGAGTAGCAAATGACGTTGAGACAGAACAAATAGTCTTTGAGGATGTTCCAGAAGGTCTTCCCATCCAGATAAGCTCTATCATCCAAAACCGTGGCTCAATCCCTCTTTTCTGGTCACAAGAAACTTCACGTCTGAATATTAAACCAGATATTATATTGTCAAAGAAGGATCAGAATTATCAAGCTACCAGGCTTCACTTTGAAAATCTCGTCAAAAGATACGGGAATCCCATTATAATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGTGAGTCGATACTTCGTTCAGAGTTTGCTAATGCCATAGATTTCATCAATAAAGATTTGTCTGAGGAGAACAGGCTTAGGTTCCTTCACTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCTGCTTCTAGGCAAAGTGGCTGCATATGCATTGGCGTTAACAGGTTTTTTCTATTGCCAAGCGACATCAACCTTGAGACCAGAAGACTGTCCAAAATGGCCACCTACAGACAATGTTGACAAGGGAAGCTTTTCACATGCCGATTATGATAACGAGGATGCTAATAACCTAGAGAGGAAACCGAGTGACGGAAACAATGTTTCCAATGAAAATCATTCTTTCAAACCACCCAGGTTGCAGAGAGGGGTGCTNAGGACCAACTGTATAGACTGCTTGGATCGCACAAATGTTGCTCAATATGCATATGGTTTGGCTGCTCTTGGCCACCAGCTCCATGCTCTGGGAATTATTGACCATCCGAAAATCGACCTCGATGATCCTGTAGCNGATGATTTGATGAGATTTTATGAGCGGATGGGTGATACACTTGCGCATCAATATGGTGGTTCTGCTGCACACAACAAGATTTTCTCGGAGAGGAGGGGCCAATGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTACAGCAATGCTTGGATGGATGCTGAGAAACAAGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGTAGGCCTGCTCTTTGGGAGTTGGGTTCAGATCAGCACTATGATACAGGGAGACTTGGTGATGACGATGCAAGGTCTATGTTCAAAAGATCCTTCTCAGATGGAAACATTCTTCGCGAAAGTTCTACACCTATGTCAGCTCCAAACGCCAAGCATGAAAAATTCCCAAACCCAGGTTTACCAGACCGATCAGGAGAAGGAAGCAAGGCTTTTTGCGAGTCATCACCTGAAATATCTACTACTGAGAGTGACATTTCATTTTCAAGGTACACTCCTTCAATGCCTCGGAGACAGCTATTTGGAGACATACAAAGAGAGCGCTGCCATGAAAGTGAACACATTTACTACTCTGAGCACGGGGATTCCTTCAGCTGCTCCAACTTTGTTGACTTGGATTGGCTATCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATACGAGAGGTCATCAATTACCAACTCCCCAATTGCTGGGCTTTCTTCAGAAAATGTTGTCAATGGAGTGATGGTAGGAGAGGCAAGTGCCTCTACTAGCGATTTTGGTAGCTCCAGCCTAAAGGGAAGGGAGCAAACTGAATCAGAGTTATCGTACAATAATGCACCGTCCAACACTCCAGAGGAATTTCCTGATACTTTTGTTCAGTGGGTGACTTATGGACAGACACTTTGCCATTGAACTTTTGCATGCGTGTGATCCTTTGCACTAATATATAGTTGACATTTTTTTTTCCAATTGACTTGGCTTTGGTCTAAAGATTCTGATTAGAAGACTACTAGAAGAGAGAGAGAGAGAGAGAGCTTATGATTGATAAGGAAGCAGGTAAAGAGACATCTACGTATGATGAGGAATCCTGCGACCATTCTTGGCAATGACATGCAGCATTGATTCTGTCGTGAAAAAATTCTCAATCAAATCCTGAAAGCATAGTAGAAAATAGTACATAGTAAATGGTTGTAAAATTCTAGTTGCCTTTTTCCCTTGCTGTTGTTGTTTCTCTGGAGTTCACTGTTTTCATTCTTGTTTGCCAGTTAAAAGATTATAGTAGGTGCACTTTTTGTAAATATTGTTACCCTGCTTGTGGGAGCAACTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00519	4372	13684	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0007033 vacuole organization

GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process

molecular_function
GO:0042578 phosphoric ester hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000519s00019087.1	PF02383.13	Syja_N	102	403	3.60E-87

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	27.005
SRR1783600	control	27.234
SRR1783602	moderate drought stress	25.039
SRR1811619	moderate drought stress	24.919

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	36.665
DRR006520	Root Summer glycyrrhizin high producing strain	36.484
DRR006521	Root Winter glycyrrhizin high producing strain	39.494
DRR006522	Root Winter glycyrrhizin high producing strain	38.695
DRR006523	Root Summer glycyrrhizin low producing strain	31.540
DRR006524	Root Summer glycyrrhizin low producing strain	31.414
DRR006525	Leaf Summer glycyrrhizin high producing strain	24.128
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.917

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	55.269
SRR2868004	Drought Stress (root)	59.470
SRR2967015	Control (root)	51.973

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	39.461
SRR9715740	Leaf	50.371
SRR9715741	Leaf	39.248
SRR9715739	Root	6.395
SRR9715742	Root	35.149
SRR9715743	Root	28.282

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.332
SRR8749028	MeJA induced 9h	19.602
SRR8749029	MeJA induced 9h	8.833
SRR8749030	Uninduced	10.000
SRR8749031	Uninduced	8.546
SRR8749032	Uninduced	6.566

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	72.847
SRR8400027	Control - Root	78.941