Gene detail information of Glyur000518s00035533 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G28350.2 | 2.00E-08 | Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor |
| NR | XP_003552406.1 | 3.30E-13 | PREDICTED: protein RIC1 homolog isoform 1 [Glycine max] |
| trEMBL | tr|K7MUC8|K7MUC8_SOYBN | 1.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G47050.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00518 | 70577 | 71038 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.129 |
| SRR1783600 | control | 1.108 |
| SRR1783602 | moderate drought stress | 1.923 |
| SRR1811619 | moderate drought stress | 1.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.704 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.673 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.242 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.233 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.834 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.801 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.201 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.773 |
| SRR2868004 | Drought Stress (root) | 2.646 |
| SRR2967015 | Control (root) | 2.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.128 |
| SRR9715740 | Leaf | 0.935 |
| SRR9715741 | Leaf | 1.267 |
| SRR9715739 | Root | 4.588 |
| SRR9715742 | Root | 4.172 |
| SRR9715743 | Root | 4.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.615 |
| SRR8749028 | MeJA induced 9h | 0.992 |
| SRR8749029 | MeJA induced 9h | 0.335 |
| SRR8749030 | Uninduced | 0.467 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.987 |
| SRR8400027 | Control - Root | 3.684 |