Gene detail information of Glyur000516s00022254 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64770.1 | 5.00E-89 | NDH-dependent cyclic electron flow 1 |
| NR | XP_003624618.1 | 0 | hypothetical protein MTR_7g085490 [Medicago truncatula] |
| trEMBL | tr|A2Q5N9|A2Q5N9_MEDTR | 0 | NDH-dependent cyclic electron flow protein, putative {ECO:0000313|EMBL:AES80836.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00516 | 60041 | 62417 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.027 |
| SRR1783600 | control | 0.027 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.081 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.079 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 71.943 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.515 |
| SRR2868004 | Drought Stress (root) | 0.371 |
| SRR2967015 | Control (root) | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 62.484 |
| SRR9715740 | Leaf | 83.813 |
| SRR9715741 | Leaf | 49.943 |
| SRR9715739 | Root | 0.059 |
| SRR9715742 | Root | 0.076 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.190 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.035 |
| SRR8749030 | Uninduced | 0.021 |
| SRR8749031 | Uninduced | 0.112 |
| SRR8749032 | Uninduced | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.124 |
| SRR8400027 | Control - Root | 0.212 |