Gene detail information of Glyur000516s00022245 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18150.1 | 8.00E-21 | Methyltransferase-related protein |
| NR | XP_004493156.1 | 2.19E-44 | PREDICTED: uncharacterized protein LOC101506066 [Cicer arietinum] |
| trEMBL | tr|I1ML24|I1ML24_SOYBN | 9.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G04550.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00516 | 3103 | 4651 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.406 |
| SRR1783600 | control | 6.535 |
| SRR1783602 | moderate drought stress | 5.091 |
| SRR1811619 | moderate drought stress | 4.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.224 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.532 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.124 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.095 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.619 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.693 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.254 |
| SRR2868004 | Drought Stress (root) | 13.504 |
| SRR2967015 | Control (root) | 13.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.841 |
| SRR9715740 | Leaf | 13.110 |
| SRR9715741 | Leaf | 13.680 |
| SRR9715739 | Root | 6.437 |
| SRR9715742 | Root | 4.494 |
| SRR9715743 | Root | 5.718 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 76.669 |
| SRR8749028 | MeJA induced 9h | 41.519 |
| SRR8749029 | MeJA induced 9h | 71.070 |
| SRR8749030 | Uninduced | 127.066 |
| SRR8749031 | Uninduced | 99.164 |
| SRR8749032 | Uninduced | 63.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.790 |
| SRR8400027 | Control - Root | 12.387 |