Gene detail information of Glyur000515s00023235 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11915.1 | 9.00E-94 | |
| NR | XP_006597593.1 | 0 | PREDICTED: uncharacterized protein LOC100798581 [Glycine max] |
| trEMBL | tr|K7MAS8|K7MAS8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G11691.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00515 | 144348 | 146004 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000515s00023235.1 | PF13947.1 | GUB_WAK_bind | 23 | 127 | 5.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.334 |
| SRR1783600 | control | 2.263 |
| SRR1783602 | moderate drought stress | 1.995 |
| SRR1811619 | moderate drought stress | 1.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.006 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.071 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.269 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.389 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.347 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.235 |
| SRR2868004 | Drought Stress (root) | 3.792 |
| SRR2967015 | Control (root) | 4.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.959 |
| SRR9715740 | Leaf | 0.156 |
| SRR9715741 | Leaf | 0.218 |
| SRR9715739 | Root | 0.278 |
| SRR9715742 | Root | 1.099 |
| SRR9715743 | Root | 1.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.119 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.156 |
| SRR8400027 | Control - Root | 2.133 |