Gene detail

Gene detail information of Glyur000515s00023231

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G62300.1	1.00E-92	WRKY family transcription factor
NR	XP_004486177.1	0	PREDICTED: probable WRKY transcription factor 31-like [Cicer arietinum]
Swissprot	tr\|Q9C519\|WRKY6_ARATH	7.00E-146	WRKY transcription factor 6
trEMBL	tr\|B3U397\|B3U397_MEDTR	0	WRKY1b transcription factor {ECO:0000313\|EMBL:KEH36906.1}

Sequence

Transcript Sequence

>Glyur000515s00023231.1
CTCCTAATAAATCAATTTTCATCACCTCTCTCAATCTGATCCCTCTTCTCCTCTCTGACTGCGACGACTCTCTGTGTCTATTCTTTTTTTTCTTTGCTCTGTTCACATATCTCTCTCTCTCTGATCTTTCATTAATTTATATGGACAAAGGATGGGGACTCACCCTTGATACTTCATCTTCATCTTCCTCTCCAATATCACTCCCTTTTTATCCCAATTCCAAAGTACAGCCACCTGCTGCTGCTGCTGCATCATCATCCTCTGTGAACCCTGCTTTCTCCAGACTCAGTACCCACGATAGGTCGAATATGTTCCCCATTTTGGGATTCCCCGTTAACCTTGTTAGCCGCAACACCAACGGCGCCGCCNAAGACGGTGATGGCCATCACCACGACAGCCGGAAAGTGGTGGGTGAGGTCGATTTCTTCTCCGACAGAAACAAGTCATCACCTTCACCTTCACCTTCAGCTGCCCGCGATGAACACCAACACGTTAAACCCAACAACACCATCACTACTACCACCACCGTCAAAAAGGAGATCATTCATACAGATGAAAAGCCTCCCAAGTCTAATATCCATGTAAATACTGGTTTACAACTTGCCAACACTGGGAGTGATCAATCTGTGGTAGATGATGGGGTTTCATCAGATGCCGAAGATAAACGAGCCAAGACCACTGAGCTTGCACAGTTGCAAGTGGAGCTTCAACGCATGAATGCAGAGAACAAGAAGCTGAAAGAGATGCTCAGCCATGTGAGCGGTAACTACACCGCTTTGCAGATGCATCTCGTGGCATTAATGCAAAAGAACCAGCATACAGAAAACACTGAAAATGAGGTTGTTCAGGCAAAAGCTGAGGAGAAAAACCAAGGTGTTGGTACTGGAGGAATGGTACCAAGACAGTTTCTTGAGATAGGTCCCAGTGGTACTACAGCCGAAGTGGATGATCAAGTATCAAATTCTTCATCCGATGAGAGAACACGATCCAACACACCTCAGGTTGAAGCTGGAACAATTAGAGATCACACGAGGAACAACANCAATGGTAAAAATGGTAGAGAAGATAGTCCAGAATCGGAATCGCAAGGTTGGGGTCCCAATAATAAGGTCCAGAAATTGAACAACCCCTCCAACTCCAATAATAACAATGCTATGGACCAATCCACCACAGATGCCACTATGAGAAAAGCCCGTGTCTCAGTTCGTGCTCGATCAGAAGCCTCCATGATCAGTGATGGGTGCCAATGGCGAAAATATGGGCAAAAAATGGCTAAGGGAAATCCTTGTCCTAGAGCATATTACAGATGCACTATGGCAGTTGGTTGCCCCGTTCGCAAACAAGTTCAACGTTGTGCTGAGGACAGAACAATTTTGGTAACAACATATGAAGGCACACATAATCATCCACTGCCACCTGCTGCTATGGCCATGGCATCGACAACCGCAGCTGCAGCAAGCATGTTGCTGTCAGGGTCCATGTCAAGTGCAGATCATGGGAATATAATGAACCCCAATTTGCTAGCAAGAGCCATTCTCCCTTGCTCTAATTCTAACATGGCAACACTTTCAGCTTCGGCACCATTCCCAACCGTCACACTTGANCTCACTCACAACCCAAACCCATTGCAATTCCAAACTAGACCCNCTGCACCAATGTTCCAGGTACCTTTCCACCTCCCAGTGCAGCAGCAACAGCCTCAGAGTTTTGGGTCCGGACCCACCCCATTTGCACAACCACAACCACAAGCAGCAACACTTTATAACCAATCTAAATTCTCTGGTCTTCAATTGTCTCAAGAAATGGGTGCTTCTTCTTCTTCTTCTTCTTCCCAATTGGCCTCAGCCACTCAAGCTCCAACAGCAACTCAACAACAGCACTCACTGGCTGACTCTGTCAGCGCCGCCACCGCAGCCATCACCGCCGACCCTAACTTCACGGCTGTTCTCGCCGCNGCCATCTCATCCATCATCGGTGGTGGTGCTCATGCAAACAACAACAACGGCCACAACAATAGCAGCAACAACAACAACAGGACTACAATTAGCAACTTTTCAGGGAACTTATAATCCTTTTTTCTTCTTTCTTTGTTGGTTCCTTAGTTTTTTTTCTTCTCCCGTTAATATTATTATTCCTTCTTTCTTTGTTTTTTTGTACATGGGTAAGGGAAAGTGAAATCATAAATGTTCATATTCTTTTTNGTCCATGTCGATCTTTGGAGGGGATAGATCAGAAAATGCGCTTCAATATTTTTTTTTTTGTAATTTAGTTATGATTTCACTTTGAATAATCTTGGATATTTGATTCAAATTTCTCAGAGTAAACAGNCAGGGAAAAAGGAGAAAAATAATAGTATATCTATTTATCTTCTTCTTCCTTTGTTTCATCGTTATCTTTCCTCAATTATCTTGGCCTGCATCCTTTCTGACAATAATGCTGAAAACAACGTGCCCAACAGAAAAGAAGAAAAAAGGGAAAAAAAATGGTGTATGTAGTATAACAACCAATACTGAACAATCCGTGTTAATTTGCTAGGAATATTCGGATAATTTACATTGGTCAAGAAATACGGCCATGACTATTTGATATGGACACGTAAATGAATGGTAGGACGTAGTAATCCAAAAGTGGACTTTAGCTAAGGAAAGGGAGAGGGTACTAGTGAGTTTCTGAGCAGCTTCGTGTGCCCTCGGTATACGTGATAGTAATAATAATAATAATGAGGGTCAACATAATAATAAATATTGGAGGTGGAAATTGAAAAAGTGAGTTGTTGGTGGACGCTGCAGATTTGAAGAGGGGGAGGATACAATATTTGACTTTGGGTGCGGTTTTGATGGACGTCGTCGCGTTCACGTTAGTGCCACCTTAATGCCCGATTGGACTAATCATGTGAGAGTATTTACCGCTAGGGATGGAGCCTGCAGACACGAGACATGTCACCTTATATATAGTAGTAGTGGTATGGAGTAACGATAAGGTGTTTACGCAGCCGCACCGTACTTCATTACACCGTACTACAAATGACTTTCATTTGACTTTATCCACAACGAAGGCGGTGGTGGGTGACTCATGTGAATTGGTTCTCTCTGGTTGAAGGAAAAAATTAATAAATAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00515	125129	128945	-

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000515s00023231.1	PF03106.10	WRKY	365	423	6.60E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.190
SRR1783600	control	16.521
SRR1783602	moderate drought stress	19.810
SRR1811619	moderate drought stress	19.571

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.002
DRR006520	Root Summer glycyrrhizin high producing strain	4.998
DRR006521	Root Winter glycyrrhizin high producing strain	1.212
DRR006522	Root Winter glycyrrhizin high producing strain	1.250
DRR006523	Root Summer glycyrrhizin low producing strain	28.015
DRR006524	Root Summer glycyrrhizin low producing strain	27.760
DRR006525	Leaf Summer glycyrrhizin high producing strain	85.727
DRR006526	Leaf Summer glycyrrhizin high producing strain	84.509

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	47.612
SRR2868004	Drought Stress (root)	73.222
SRR2967015	Control (root)	70.078

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	136.034
SRR9715740	Leaf	126.158
SRR9715741	Leaf	191.657
SRR9715739	Root	17.303
SRR9715742	Root	55.317
SRR9715743	Root	41.065

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	307.061
SRR8749028	MeJA induced 9h	455.043
SRR8749029	MeJA induced 9h	319.019
SRR8749030	Uninduced	242.217
SRR8749031	Uninduced	379.849
SRR8749032	Uninduced	247.298

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.558
SRR8400027	Control - Root	36.279