Gene detail information of Glyur000514s00017586 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003548975.2 | 3.08E-18 | PREDICTED: ethylene-responsive transcription factor ABR1-like isoform X1 [Glycine max] |
| trEMBL | tr|I1MP48|I1MP48_SOYBN | 1.00E-18 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G27950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00514 | 128251 | 129933 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.687 |
| SRR1783600 | control | 0.593 |
| SRR1783602 | moderate drought stress | 0.961 |
| SRR1811619 | moderate drought stress | 1.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.904 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.852 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.920 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.835 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.313 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.205 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.598 |
| SRR2868004 | Drought Stress (root) | 11.027 |
| SRR2967015 | Control (root) | 15.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.601 |
| SRR9715740 | Leaf | 1.298 |
| SRR9715741 | Leaf | 4.294 |
| SRR9715739 | Root | 1.896 |
| SRR9715742 | Root | 1.979 |
| SRR9715743 | Root | 1.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 62.351 |
| SRR8749028 | MeJA induced 9h | 131.231 |
| SRR8749029 | MeJA induced 9h | 57.411 |
| SRR8749030 | Uninduced | 43.745 |
| SRR8749031 | Uninduced | 87.561 |
| SRR8749032 | Uninduced | 66.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.684 |
| SRR8400027 | Control - Root | 3.827 |