Gene detail information of Glyur000514s00017577 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21090.1 | 1.00E-36 | Cupredoxin superfamily protein |
| NR | XP_003555406.1 | 6.89E-108 | PREDICTED: early nodulin-55-2-like [Glycine max] |
| trEMBL | tr|K7N3Y1|K7N3Y1_SOYBN | 3.00E-108 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30790.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00514 | 66646 | 68076 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.183 |
| SRR1783600 | control | 32.080 |
| SRR1783602 | moderate drought stress | 19.957 |
| SRR1811619 | moderate drought stress | 21.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.917 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 58.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.298 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.451 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.974 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.129 |
| SRR2868004 | Drought Stress (root) | 6.777 |
| SRR2967015 | Control (root) | 9.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.265 |
| SRR9715740 | Leaf | 0.127 |
| SRR9715741 | Leaf | 0.812 |
| SRR9715739 | Root | 9.946 |
| SRR9715742 | Root | 7.454 |
| SRR9715743 | Root | 7.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.174 |
| SRR8749028 | MeJA induced 9h | 0.014 |
| SRR8749029 | MeJA induced 9h | 0.124 |
| SRR8749030 | Uninduced | 0.080 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.241 |
| SRR8400027 | Control - Root | 23.393 |