Gene detail information of Glyur000513s00025385 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05290.1 | 1.00E-125 | peroxisomal adenine nucleotide carrier 1 |
| NR | XP_004490036.1 | 0 | PREDICTED: peroxisomal adenine nucleotide carrier 1-like [Cicer arietinum] |
| Swissprot | tr|B6ZJZ9|PNC1_SOYBN | 0 | Peroxisomal adenine nucleotide carrier 1 |
| trEMBL | tr|I1J5P2|I1J5P2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G05440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00513 | 92265 | 95794 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000513s00025385.1 | PF00153.22 | Mito_carr | 6 | 98 | 9.70E-15 |
| Glyur000513s00025385.1 | PF00153.22 | Mito_carr | 105 | 187 | 3.40E-08 |
| Glyur000513s00025385.1 | PF00153.22 | Mito_carr | 202 | 294 | 2.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 51.747 |
| SRR1783600 | control | 52.214 |
| SRR1783602 | moderate drought stress | 37.960 |
| SRR1811619 | moderate drought stress | 37.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 79.781 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 77.449 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 69.009 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 66.958 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 100.438 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 100.664 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.792 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.596 |
| SRR2868004 | Drought Stress (root) | 44.001 |
| SRR2967015 | Control (root) | 47.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.381 |
| SRR9715740 | Leaf | 16.603 |
| SRR9715741 | Leaf | 34.746 |
| SRR9715739 | Root | 29.238 |
| SRR9715742 | Root | 58.299 |
| SRR9715743 | Root | 47.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 99.854 |
| SRR8749028 | MeJA induced 9h | 112.896 |
| SRR8749029 | MeJA induced 9h | 187.171 |
| SRR8749030 | Uninduced | 133.583 |
| SRR8749031 | Uninduced | 194.035 |
| SRR8749032 | Uninduced | 131.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.514 |
| SRR8400027 | Control - Root | 45.381 |