Gene detail information of Glyur000513s00025381 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58210.1 | 1.00E-07 | kinase interacting family protein |
| NR | KEH22328.1 | 1.42E-78 | SANTA (SANT associated) protein [Medicago truncatula] |
| trEMBL | tr|A0A072TZN4|A0A072TZN4_MEDTR | 5.00E-79 | SANTA (SANT associated) protein {ECO:0000313|EMBL:KEH22328.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00513 | 70701 | 72825 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000513s00025381.1 | PF09133.5 | SANTA | 93 | 145 | 6.30E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.343 |
| SRR1783600 | control | 0.397 |
| SRR1783602 | moderate drought stress | 0.257 |
| SRR1811619 | moderate drought stress | 0.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.384 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.385 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.387 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.016 |
| SRR2868004 | Drought Stress (root) | 3.247 |
| SRR2967015 | Control (root) | 3.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.632 |
| SRR9715740 | Leaf | 0.274 |
| SRR9715741 | Leaf | 0.123 |
| SRR9715739 | Root | 0.046 |
| SRR9715742 | Root | 0.134 |
| SRR9715743 | Root | 0.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.111 |
| SRR8749028 | MeJA induced 9h | 18.878 |
| SRR8749029 | MeJA induced 9h | 20.006 |
| SRR8749030 | Uninduced | 13.526 |
| SRR8749031 | Uninduced | 11.373 |
| SRR8749032 | Uninduced | 8.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.830 |
| SRR8400027 | Control - Root | 1.467 |