Gene detail information of Glyur000512s00017087 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004510583.1 | 1.95E-16 | PREDICTED: uncharacterized protein LOC101493469 [Cicer arietinum] |
| trEMBL | tr|G7L957|G7L957_MEDTR | 7.00E-17 | Late embryogenesis abundant protein {ECO:0000313|EMBL:AET01911.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00512 | 116358 | 116601 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000512s00017087.1 | PF03242.8 | LEA_3 | 19 | 71 | 2.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.996 |
| SRR1783600 | control | 9.135 |
| SRR1783602 | moderate drought stress | 1.362 |
| SRR1811619 | moderate drought stress | 1.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.834 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.832 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.394 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.545 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.249 |
| SRR2868004 | Drought Stress (root) | 0.344 |
| SRR2967015 | Control (root) | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.299 |
| SRR9715740 | Leaf | 1.073 |
| SRR9715741 | Leaf | 0.544 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.906 |
| SRR9715743 | Root | 1.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.104 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.135 |
| SRR8400027 | Control - Root | 0.681 |