Gene detail information of Glyur000512s00017078 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14280.1 | 4.00E-13 | |
| NR | XP_004510567.1 | 7.32E-56 | PREDICTED: uncharacterized protein LOC101515722 isoform X1 [Cicer arietinum] |
| trEMBL | tr|C6T3A5|C6T3A5_SOYBN | 7.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G01610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00512 | 82484 | 83629 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.914 |
| SRR1783600 | control | 17.931 |
| SRR1783602 | moderate drought stress | 14.165 |
| SRR1811619 | moderate drought stress | 13.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 51.359 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.478 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 89.519 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 86.786 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 84.345 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 82.914 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.477 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 120.220 |
| SRR2868004 | Drought Stress (root) | 192.781 |
| SRR2967015 | Control (root) | 126.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.092 |
| SRR9715740 | Leaf | 9.440 |
| SRR9715741 | Leaf | 12.979 |
| SRR9715739 | Root | 11.690 |
| SRR9715742 | Root | 9.561 |
| SRR9715743 | Root | 7.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 58.705 |
| SRR8749028 | MeJA induced 9h | 46.910 |
| SRR8749029 | MeJA induced 9h | 35.578 |
| SRR8749030 | Uninduced | 6.927 |
| SRR8749031 | Uninduced | 2.040 |
| SRR8749032 | Uninduced | 2.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 50.207 |
| SRR8400027 | Control - Root | 33.983 |