Gene detail

Gene detail information of Glyur000511s00022058

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G10760.1	0	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
NR	XP_004509565.1	0	PREDICTED: alpha-glucan water dikinase, chloroplastic-like [Cicer arietinum]
COG	YP_003653168.1	3.00E-13	pyruvate phosphate dikinase PEP/pyruvate- binding protein [Thermobispora bispora DSM 43833]
Swissprot	tr\|Q8LPT9\|GWD1_CITRE	0	Alpha-glucan water dikinase, chloroplastic (Precursor)
trEMBL	tr\|I1KXC2\|I1KXC2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G39110.1}

Sequence

Transcript Sequence

>Glyur000511s00022058.1
CCAACCGCTATCATACACTGACACACACACCCACACCACTCTCTCTATTCGAAGCTCTCTCCATCAACGTAGATTTTCATTTTCCCTTTCCATTCCCATTCCCATTCCCATTCTCGCGAGATTTCAATCTCGCACTCTTCTTTCGGAGCTCCACCCGAAGCTGCTTTCACCTTTCACCGATTCAAGAAGGTTCCTAATCCCTGTTTTCAGAACACAAGGAGAGTGGATCCACCAAGATGAGCCATAGCATCTTCCACCAGACGGTGCTTTGTCAAACTCAAACGGTTGCGGAGCATCNAAGTAAGCTTGGTTCTCGCGGCATAACCGCCAACAACACTTTATTCCAATCGCCGAGTGTTAACAAAGGAAAGAAGCTTCTGCTTTCTACAAATTTCCGCGGGANCAGGTTGTGCGTTAGGAAACGGAAATTATTAGCCATGGGAAGGAACCGCCANGCCCAAGCCATTCCACGCGCTGTGTTAACCTCGAATCCGGCTTCTGAGCTTTCAGGGAAGTTCAACCTTGAGGGAAATATTGAATTGCAGGTTGGTGTTAGTTCTTCAGTACCAGGAGCTGCAACCCAAGTTGATATTCAGGTTTCAAATAGTAGCGGCTCTTTGGTTTTGCATTGGGGAATTATATGTGAAAGGGAAGGGAAGTGGGTACGTCCCTCTCGTCGCCCAGATGGAACTAAAGTTTATAAGAACAGAGCTCTTAGAACTCCGTTTGTGAAATCTGGCTCGGGATCCTTACTCAAAATAGAAATTGATGATCCTGCTGCACGAGCCATTGAGTTCCTTATAGTCGANGAAGCTCAGAATAAGTTTAAAAACAATGGTGATAACTTTCACATCAAGTTACCGGTAAAAGATAAGCTTGTTCCACAAGCTTCAATTCCTGAAGACCTTGTACAAGTTCAAGCATATCTTAGGTGGGAACGAAAGGGTAAGCAGATGTACACCCCAGAGCAAGAGAAGGAGGAATATGAAGCAGCTCGACGTGAACTAGTCGAGGAAGTAGCTAGGGGTACTTCTGTACAAGACCTCCGTGCAAGGTTGGCTAACAAAGCTAATGCTGCTGAAGTAAAGGAGCCTTCTGTTTCTGAAACAAAGACCATCCCTGATGATGTTTCTCAAACAAAGACCATCCCTGATAATGTTTCTCAAACAAAGACCATCCCTGATGATGTTTCTCAAACAAAGACCATCCCTGATGAACTTGTACAGATTCAAGCTTTTATACACTGGGAAAAAGCTGGGAAGCCTAATTATTCTCCAGAAGAACAACTTATGGAATTTGAGGAAGCAAGAAAAGAATTGCAAGCTGAGCTTGAGAAGGGTGCTTCTCTGGATGAGATACGGACGAAGATTACCAAAGGAGAGATACAAACTAAAGTTGTCAAGCAATTGAAAACCAAAAAGTACTTTCATGTTGAAAGAATACAAAGGAAAAAGAGAGATTTGATGCAACTTATCAACAGAAATGTTGCCGAAAATATAGTTGAACAATCTGTAGATGCTCCAAAGACCTTGACAGTAATGGATCGCTATGCCAAGGCAAGGGAAGAATATGATAGGGGTCTTGTTTTGAGTAGGACAATTTTCAAGATTGCTGATAATGATCTTCTGGTCTTCATTACCAAAGATGCTGGTAAGATTAAGGTTCACCTGGCTACAGACTCCAAAACACCTGTTACACTTCACTGGGCCTTATCTAGAACACCTGGAGAGTGGTTGGTACCACCTGCAAGTGCTCTGGCCCCGGGATCTGTTATTATGGANAAGGCTGTTGAAACACCTTTTAAAGCTGGTTCTTCATCTCATCCTTCTCATGAGGTCCAGTCCTTAGATATAGAGGTTGATGATGATACTTTTAAAGGAATAACTTTTGTCATTCTGTCAGACGGAAAATGGTTAAAGAACAATGGATCAGATTTTTATATTGAATTTGGTGGGAAGAAGCAGATACAAAAGGATCTTGGTGACGGAAAAGGTACAGCCAAGTTCTTGTTGGATAAAATAGCAGNAATGGAAGGTGAGGCACAGAAGTCCTTTATGCATCGATTTAACATTGCATCAGATTTGATAGATCAAGCAAAAAAGGCTGGTCAATTGGGTCTTGCGGGGATTTTGGTGTGGATGAGATTTATGGCTACGAGACAGCTCATATGGAACAAAAATTACAACGTGAAGCCACGTGAGATAAGTAAAGCCCAGGATAGGCTTACCGACTTGCTTCAGGATGTTTATGCAAGTTATCCACAGTATAGGGAAGTTGTGAGGATGATCCTTTCTACTGTTGGTCGTGGAGGTGAAGGTGATGTGGGACAGCGTATTCGAGATGAAATCCTTGTTATCCAGAGAAAAAATGAATGCAAGGGTGGAATGATGGAGGAATGGCACCAAAAGTTACACAATAATACTAGTCCAGATGATGTTGTAATCTGTCAGGCATTAATTGATTATATAAGTAGCGACTTTGACATTGGTGTTTACTGGAAAACATTAAATGACAATGGAATAACAAAAGAACGTCTTCTGAGCTATGACCGTGGCATCCATTCTGAACCAAATTTTAGGAGAGATCAAAAGGAAAGTCTTTTGCGAGATCTGGGACACTACATGAGGACATTGAAGGCAGTTCATTCAGGTGCAGATCTTGAATCTGCTATTACAAATTGTTTAGGCTACAAATCCGAGGGCCAGGGCTTCATGGTTGGGGTGCAGATAAATTCGGTGTCTGGTTTGCCATCTGGTTTTACTGCTCGTCAAGATCTCCGACCGTTACTCAACAAGTCCCAAAGTCGTCTGAAAGATCTTTTATTTTTGGATGTTGCCCTTGATTCTACGGTTAGAACAGCAGTTGAAAGGGGATATGAGGAGTTAAACAATGCTGGGCCTGAGAAAATAATGCACTTTATCTGCCTGGTTCTTGAAAACCTTGCACTTTCATCAGACGACAATGAAGATCTTATCTACTGTTTGAAGGGGTGGGATCTTGCCTTAAGCATGTGCAAGGGTAAAGACACTCATTGGGCATTGTATGCAAAGTCAGTCCTTGACAGAACACGCCTTGCCCTTACAAACAAGGCAGAGTCATACCAGAAAATTCTGCAACCATCGGCAGAGTATCTTGGATCACAACTTGGCGTGGACAGATGGGCTGTGGAAATATTTACAGAAGAAATTATCCGTGCTGGATCTGCTGCTTCTTTGTCTACTCTTCTAAATCGACTTGATCCTGTACTCCGGAAGACAGCTAATCTTGGAAGCTGGCAAGTTATTAGCCCAGTTGAAACCGTTGGATATGTTGAGGTTGTGGATGAGTTGCTTGCTGTTCAAAACAAAACATATGAGCGGCCTACAATTTTGATAGCCAAGAGTGTGAAGGGAGAGGAAGAAATTCCAGATGGTACAGTTGCTGTCCTGACACCTGATATGCCAGATGTCCTTTCNCATGTTTCCGTACGAGCAAGAAATAGCAAGGTGTGTTTTGCTACATGCTTTGATCCCAATATCCTTGCTAACCTCCAAGCAAAAAAAGGAAAGCTCTTGTTCTTAAAGCCTACATCTGCAGATGTTGTTTATAGTGAGGTCAAGGAGGATGAGCTTATTGATGACAAATCATCTCACCTGGATGTTGATTCCATGCCATCATTATCTTTGGTCAAAAAGCAGTTTAGTGGTAGATATGCTGTCTCTTCTGAAGAATTCACTGGTGAAATGGTTGGAGCTAAATCTCGTAATATCTCTTATTTAAAAGGAAAAGTGCCTTCTTGGATTGGAATTCCTACTTCAGTTGCCATACCATTTGGTGTTTTTGAACATGTTCTCTCTGATAAATCAAATCAGGCTGTGGCTGAGAAGGTCAATATTATGAAGAAGAAGTTAACTGAGGGAGACTTCAGTGCCCTCAAGGAGATTCGTGAAACAGTTTTACAGTTGAATGCACCACCCCAGTTGGTAGGGGAGTTGAAAACCAAGATGAAGAGTTCTGGAATGCCTTGGCCAGGTGATGAAGGTGAACAACNCTGGGAACAGGCATGGAAGGCTATAAAAAAGGTGTGGGGCTCGAAGTGGAACGAAAGAGCATACTTCAGCACAAGAAAAGTGAAACTCGACCACGACTATCTTTCCATGGCTGTCCTTGTGCAGGAAGTGATCAATGCTGACTATGCTTTTGTCATCCACACAACTAATCCATCCTCTGGAGATTCATCGGAAATATATGCTGAGGTGGTAAAGGGACTTGGAGAGACACTGGTTGGAGCTTATCCTGGTCGTGCTTTGAGTTTTATCTGCAAAAAACATGATTTGAACTCTCCTCAGGTCTTGGGTTATCCTAGCAAACCTATTGGCCTATTTATAAGACGGTCAATTATTTTTCGATCTGATTCCAATGGCGAAGATCTAGAAGGTTATGCTGGTGCTGGCCTTTATGACAGTGTGCCAATGGATGAAGAGGAGAAAGTGGTGCTTGATTACTCATCAGACAAACTGATGATTGATGGTAGTTTTCGCCAGTCAATNTTGTCAAGCATTGCCCGTGCAGGAAATGCAATTGAAGAGTTGTATGGCACTCCTCAGGACATTGAAGGTGTCATCAGGGATGGAAAAGTCTATGTTGTCCAGACCAGACCACAAATGTAGGACTCTAGATCCATATCACCTAAGCCGCATACATCAACTAGGTTCATCCCCTTGCTACATGGCACTTCAAACGGGTGTAGCTTCTTGCGAGTTTGAGAGTAAACCTGCGGATTACGAACATTTAATGTAAGTGATATATCAAAATAAGGAATAATTTATGCGTCACTATAGAATAATGTAAACACAGAAAAACTTAAATGTTCCTATTCTTTTTTTTTCCTACCATATATTATATCTATAATTTCTTCTTCCTCACCAATGCTGTACTCTTGAGGTCTACTGCCCATGGTTAGGTTATATAGTAAGCGTTTGAATTTATTATTTCAATGTTTTTATTCAGAGTGCCTTTTTAAATGTGCATTAGTTAAAATCAT

Protein Sequence

>Glyur000511s00022058.1
MSHSIFHQTVLCQTQTVAEHXSKLGSRGITANNTLFQSPSVNKGKKLLLSTNFRGXRLCVRKRKLLAMGRNRXAQAIPRAVLTSNPASELSGKFNLEGNIELQVGVSSSVPGAATQVDIQVSNSSGSLVLHWGIICEREGKWVRPSRRPDGTKVYKNRALRTPFVKSGSGSLLKIEIDDPAARAIEFLIVXEAQNKFKNNGDNFHIKLPVKDKLVPQASIPEDLVQVQAYLRWERKGKQMYTPEQEKEEYEAARRELVEEVARGTSVQDLRARLANKANAAEVKEPSVSETKTIPDDVSQTKTIPDNVSQTKTIPDDVSQTKTIPDELVQIQAFIHWEKAGKPNYSPEEQLMEFEEARKELQAELEKGASLDEIRTKITKGEIQTKVVKQLKTKKYFHVERIQRKKRDLMQLINRNVAENIVEQSVDAPKTLTVMDRYAKAREEYDRGLVLSRTIFKIADNDLLVFITKDAGKIKVHLATDSKTPVTLHWALSRTPGEWLVPPASALAPGSVIMXKAVETPFKAGSSSHPSHEVQSLDIEVDDDTFKGITFVILSDGKWLKNNGSDFYIEFGGKKQIQKDLGDGKGTAKFLLDKIAXMEGEAQKSFMHRFNIASDLIDQAKKAGQLGLAGILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDLLQDVYASYPQYREVVRMILSTVGRGGEGDVGQRIRDEILVIQRKNECKGGMMEEWHQKLHNNTSPDDVVICQALIDYISSDFDIGVYWKTLNDNGITKERLLSYDRGIHSEPNFRRDQKESLLRDLGHYMRTLKAVHSGADLESAITNCLGYKSEGQGFMVGVQINSVSGLPSGFTARQDLRPLLNKSQSRLKDLLFLDVALDSTVRTAVERGYEELNNAGPEKIMHFICLVLENLALSSDDNEDLIYCLKGWDLALSMCKGKDTHWALYAKSVLDRTRLALTNKAESYQKILQPSAEYLGSQLGVDRWAVEIFTEEIIRAGSAASLSTLLNRLDPVLRKTANLGSWQVISPVETVGYVEVVDELLAVQNKTYERPTILIAKSVKGEEEIPDGTVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPNILANLQAKKGKLLFLKPTSADVVYSEVKEDELIDDKSSHLDVDSMPSLSLVKKQFSGRYAVSSEEFTGEMVGAKSRNISYLKGKVPSWIGIPTSVAIPFGVFEHVLSDKSNQAVAEKVNIMKKKLTEGDFSALKEIRETVLQLNAPPQLVGELKTKMKSSGMPWPGDEGEQXWEQAWKAIKKVWGSKWNERAYFSTRKVKLDHDYLSMAVLVQEVINADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFICKKHDLNSPQVLGYPSKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKVVLDYSSDKLMIDGSFRQSXLSSIARAGNAIEELYGTPQDIEGVIRDGKVYVVQTRPQM

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00511	122917	141204	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	CBM45,CBM45

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0016310 phosphorylation

molecular_function

GO:0003824 catalytic activity

GO:0005524 ATP binding

GO:0016301 kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000511s00022058.1	PF01326.14	PPDK_N	1266	1469	9.00E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	62.253
SRR1783600	control	62.548
SRR1783602	moderate drought stress	75.125
SRR1811619	moderate drought stress	75.110

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	41.874
DRR006520	Root Summer glycyrrhizin high producing strain	41.656
DRR006521	Root Winter glycyrrhizin high producing strain	116.678
DRR006522	Root Winter glycyrrhizin high producing strain	112.782
DRR006523	Root Summer glycyrrhizin low producing strain	45.085
DRR006524	Root Summer glycyrrhizin low producing strain	44.719
DRR006525	Leaf Summer glycyrrhizin high producing strain	108.389
DRR006526	Leaf Summer glycyrrhizin high producing strain	108.589

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	53.819
SRR2868004	Drought Stress (root)	45.108
SRR2967015	Control (root)	46.538

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	52.722
SRR9715740	Leaf	57.436
SRR9715741	Leaf	60.682
SRR9715739	Root	10.998
SRR9715742	Root	67.712
SRR9715743	Root	59.538

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.507
SRR8749028	MeJA induced 9h	30.045
SRR8749029	MeJA induced 9h	23.475
SRR8749030	Uninduced	5.914
SRR8749031	Uninduced	2.595
SRR8749032	Uninduced	5.705

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	80.187
SRR8400027	Control - Root	76.423