Gene detail information of Glyur000511s00022057 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17100.1 | 1.00E-23 | SOUL heme-binding family protein |
| NR | XP_004509563.1 | 4.09E-104 | PREDICTED: heme-binding protein 2-like [Cicer arietinum] |
| trEMBL | tr|A0A072TS05|A0A072TS05_MEDTR | 5.00E-102 | SOUL heme-binding family protein {ECO:0000313|EMBL:KEH20197.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00511 | 119863 | 122602 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000511s00022057.1 | PF04832.7 | SOUL | 26 | 198 | 5.50E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.784 |
| SRR1783600 | control | 5.766 |
| SRR1783602 | moderate drought stress | 9.432 |
| SRR1811619 | moderate drought stress | 9.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 93.295 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 91.449 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.151 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.149 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.116 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.070 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.287 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.722 |
| SRR2868004 | Drought Stress (root) | 12.385 |
| SRR2967015 | Control (root) | 11.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.118 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.299 |
| SRR9715739 | Root | 0.238 |
| SRR9715742 | Root | 21.909 |
| SRR9715743 | Root | 20.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.280 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.896 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.168 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.540 |
| SRR8400027 | Control - Root | 17.125 |