Gene detail information of Glyur000511s00022056 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10750.1 | 2.00E-175 | Protein of Unknown Function (DUF239) |
| NR | XP_007153763.1 | 0 | hypothetical protein PHAVU_003G063100g [Phaseolus vulgaris] |
| trEMBL | tr|V7C6G9|V7C6G9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW25757.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00511 | 108087 | 112512 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000511s00022056.1 | PF14365.1 | DUF4409 | 67 | 174 | 3.20E-36 |
| Glyur000511s00022056.1 | PF03080.10 | DUF239 | 179 | 414 | 4.80E-90 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.953 |
| SRR1783600 | control | 1.115 |
| SRR1783602 | moderate drought stress | 1.471 |
| SRR1811619 | moderate drought stress | 1.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.328 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.045 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.526 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.569 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.766 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.799 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.302 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.615 |
| SRR2868004 | Drought Stress (root) | 5.028 |
| SRR2967015 | Control (root) | 5.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.134 |
| SRR9715740 | Leaf | 8.672 |
| SRR9715741 | Leaf | 10.530 |
| SRR9715739 | Root | 0.771 |
| SRR9715742 | Root | 3.227 |
| SRR9715743 | Root | 3.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.174 |
| SRR8400027 | Control - Root | 4.317 |