Gene detail information of Glyur000510s00021554 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07090.1 | 3.00E-97 | PPPDE putative thiol peptidase family protein |
| NR | XP_004492309.1 | 1.62E-156 | PREDICTED: desumoylating isopeptidase 1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q93VG8|PPDEX_ARATH | 1.00E-11 | DeSI-like protein At4g17486 |
| trEMBL | tr|C6THR3|C6THR3_SOYBN | 4.00E-153 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G36840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00510 | 75638 | 78737 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000510s00021554.1 | PF05903.9 | Peptidase_C97 | 7 | 145 | 2.90E-44 |
| Glyur000510s00021554.2 | PF05903.9 | Peptidase_C97 | 7 | 145 | 2.90E-44 |
| Glyur000510s00021554.3 | PF05903.9 | Peptidase_C97 | 7 | 145 | 2.90E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.604 |
| SRR1783600 | control | 26.554 |
| SRR1783602 | moderate drought stress | 16.273 |
| SRR1811619 | moderate drought stress | 16.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 71.871 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 70.996 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.715 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.951 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.586 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.043 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.621 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 80.235 |
| SRR2868004 | Drought Stress (root) | 90.780 |
| SRR2967015 | Control (root) | 57.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 162.834 |
| SRR9715740 | Leaf | 129.418 |
| SRR9715741 | Leaf | 170.958 |
| SRR9715739 | Root | 19.764 |
| SRR9715742 | Root | 46.161 |
| SRR9715743 | Root | 37.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 134.787 |
| SRR8749028 | MeJA induced 9h | 104.098 |
| SRR8749029 | MeJA induced 9h | 203.823 |
| SRR8749030 | Uninduced | 146.905 |
| SRR8749031 | Uninduced | 216.895 |
| SRR8749032 | Uninduced | 226.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.565 |
| SRR8400027 | Control - Root | 55.790 |