Gene detail information of Glyur000510s00021548 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006595338.1 | 6.43E-124 | PREDICTED: protein NYNRIN-like [Glycine max] |
| COG | NP_682894.1 | 2.00E-07 | transposase(integrase) [Thermosynechococcus elongatus BP-1] |
| trEMBL | tr|A5BIC6|A5BIC6_VITVI | 1.00E-101 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN74623.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00510 | 32051 | 32881 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000510s00021548.1 | PF00665.21 | rve | 2 | 89 | 7.90E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.837 |
| SRR1783600 | control | 2.007 |
| SRR1783602 | moderate drought stress | 4.708 |
| SRR1811619 | moderate drought stress | 4.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.221 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.266 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.873 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.811 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.278 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.376 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.453 |
| SRR2868004 | Drought Stress (root) | 2.902 |
| SRR2967015 | Control (root) | 1.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.409 |
| SRR9715740 | Leaf | 0.655 |
| SRR9715741 | Leaf | 0.713 |
| SRR9715739 | Root | 0.215 |
| SRR9715742 | Root | 1.080 |
| SRR9715743 | Root | 0.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.473 |
| SRR8749028 | MeJA induced 9h | 0.453 |
| SRR8749029 | MeJA induced 9h | 0.331 |
| SRR8749030 | Uninduced | 0.026 |
| SRR8749031 | Uninduced | 0.201 |
| SRR8749032 | Uninduced | 0.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.237 |
| SRR8400027 | Control - Root | 2.746 |