Gene detail information of Glyur000509s00016414 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42860.1 | 3.00E-62 | |
| NR | XP_003528962.1 | 3.94E-178 | PREDICTED: uncharacterized protein LOC100811519 [Glycine max] |
| trEMBL | tr|I1KJ25|I1KJ25_SOYBN | 1.00E-178 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G11160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00509 | 117815 | 120131 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 67.730 |
| SRR1783600 | control | 68.212 |
| SRR1783602 | moderate drought stress | 47.844 |
| SRR1811619 | moderate drought stress | 47.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 48.039 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.382 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.859 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.584 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.768 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.860 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.907 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.385 |
| SRR2868004 | Drought Stress (root) | 30.946 |
| SRR2967015 | Control (root) | 34.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.103 |
| SRR9715740 | Leaf | 16.401 |
| SRR9715741 | Leaf | 20.152 |
| SRR9715739 | Root | 21.309 |
| SRR9715742 | Root | 20.798 |
| SRR9715743 | Root | 17.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.751 |
| SRR8749028 | MeJA induced 9h | 18.511 |
| SRR8749029 | MeJA induced 9h | 18.821 |
| SRR8749030 | Uninduced | 8.375 |
| SRR8749031 | Uninduced | 3.066 |
| SRR8749032 | Uninduced | 3.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.214 |
| SRR8400027 | Control - Root | 40.798 |