Gene detail information of Glyur000508s00033172 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G25570.1 | 4.00E-154 | Di-glucose binding protein with Leucine-rich repeat domain |
| NR | XP_004490279.1 | 0 | PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Cicer arietinum] |
| Swissprot | tr|Q9FZB1|Y5188_ARATH | 1.00E-25 | Probable LRR receptor-like serine/threonine-protein kinase At1g51880 (Precursor) |
| trEMBL | tr|G7JX54|G7JX54_MEDTR | 0 | LRR Di-glucose-binding protein {ECO:0000313|EMBL:AES97395.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00508 | 9952 | 12832 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000508s00033172.1 | PF12819.2 | Malectin_like | 34 | 373 | 5.40E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.077 |
| SRR1783600 | control | 15.585 |
| SRR1783602 | moderate drought stress | 10.661 |
| SRR1811619 | moderate drought stress | 10.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.749 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.819 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.041 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.323 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.214 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.547 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.961 |
| SRR2868004 | Drought Stress (root) | 12.154 |
| SRR2967015 | Control (root) | 14.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.545 |
| SRR9715740 | Leaf | 4.581 |
| SRR9715741 | Leaf | 6.177 |
| SRR9715739 | Root | 6.240 |
| SRR9715742 | Root | 12.723 |
| SRR9715743 | Root | 10.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.519 |
| SRR8749028 | MeJA induced 9h | 11.518 |
| SRR8749029 | MeJA induced 9h | 3.824 |
| SRR8749030 | Uninduced | 0.889 |
| SRR8749031 | Uninduced | 0.750 |
| SRR8749032 | Uninduced | 1.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.297 |
| SRR8400027 | Control - Root | 21.929 |