Gene detail information of Glyur000507s00030441 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52800.1 | 8.00E-27 | A20/AN1-like zinc finger family protein |
| NR | XP_004516195.1 | 2.04E-59 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Cicer arietinum] |
| Swissprot | tr|Q9SJM6|SAP4_ARATH | 6.00E-41 | Zinc finger A20 and AN1 domain-containing stress-associated protein 4 |
| trEMBL | tr|V7BL36|V7BL36_PHAVU | 1.00E-56 | Uncharacterized protein {ECO:0000313|EMBL:ESW17311.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00507 | 89083 | 89511 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000507s00030441.1 | PF01428.11 | zf-AN1 | 83 | 121 | 1.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.810 |
| SRR1783600 | control | 31.139 |
| SRR1783602 | moderate drought stress | 29.105 |
| SRR1811619 | moderate drought stress | 30.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 86.222 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 82.075 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.803 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 103.229 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 102.711 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.760 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.616 |
| SRR2868004 | Drought Stress (root) | 56.464 |
| SRR2967015 | Control (root) | 71.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 301.152 |
| SRR9715740 | Leaf | 350.549 |
| SRR9715741 | Leaf | 235.662 |
| SRR9715739 | Root | 456.171 |
| SRR9715742 | Root | 186.418 |
| SRR9715743 | Root | 243.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 133.537 |
| SRR8749028 | MeJA induced 9h | 145.250 |
| SRR8749029 | MeJA induced 9h | 109.118 |
| SRR8749030 | Uninduced | 93.622 |
| SRR8749031 | Uninduced | 54.199 |
| SRR8749032 | Uninduced | 111.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 84.409 |
| SRR8400027 | Control - Root | 105.379 |