Gene detail information of Glyur000507s00030440 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52820.1 | 2.00E-157 | purple acid phosphatase 22 |
| NR | KEH42047.1 | 0 | purple acid phosphatase superfamily protein [Medicago truncatula] |
| COG | YP_004902613.1 | 4.00E-16 | putative phosphodiesterase [Kitasatospora setae KM-6054] |
| Swissprot | tr|Q8S340|PPA22_ARATH | 0 | Purple acid phosphatase 22 (Precursor) |
| trEMBL | tr|A0A072VJR0|A0A072VJR0_MEDTR | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00507 | 80606 | 86924 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000507s00030440.1 | PF00149.23 | Metallophos | 173 | 341 | 3.10E-18 |
| Glyur000507s00030440.1 | PF14008.1 | Metallophos_C | 359 | 403 | 2.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.388 |
| SRR1783600 | control | 1.460 |
| SRR1783602 | moderate drought stress | 1.972 |
| SRR1811619 | moderate drought stress | 1.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.543 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.524 |
| SRR2868004 | Drought Stress (root) | 2.259 |
| SRR2967015 | Control (root) | 1.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.111 |
| SRR9715740 | Leaf | 0.410 |
| SRR9715741 | Leaf | 1.116 |
| SRR9715739 | Root | 1.322 |
| SRR9715742 | Root | 1.342 |
| SRR9715743 | Root | 1.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.761 |
| SRR8400027 | Control - Root | 27.123 |