Gene detail

Gene detail information of Glyur000507s00030433.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G36305.1	2.00E-95	farnesylated protein-converting enzyme 2
NR	XP_004516198.1	0	PREDICTED: CAAX prenyl protease 2-like [Cicer arietinum]
Swissprot	tr\|Q8GW19\|FACE2_ARATH	3.00E-122	CAAX prenyl protease 2
trEMBL	tr\|K7LHW6\|K7LHW6_SOYBN	2.00E-178	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G08320.2}

Sequence

Transcript Sequence

>Glyur000507s00030433.1
TACAACTCATCATTTCCCCAAACAGAGGACTACCGACCATCAATTCCTCAAGCTGACGACAACANTCATGTCCCTGAAAGCTTTGTTGNTGGTTTNCACAATGAAGAAGTAGGAGACTTCAGTGAAGATGAGGATGAAATTAACCTTCAGAATGTTGACTTNGACAATATTGACACCGAAGAACCTGCTGTAGATGCNCCTCCTTACGACCCGCCTTCACACTTCCACAATGTCAACATAGACNAAGTGGGAAAATATACCAACCGTACTGAAGGAGTCAAACCTAAGGACTGGAATAATGTAAGATTTTTCAGGAGTGAAATTCTCCGCCATTCTATGTCTCTAGGGTTACCGCCATCGCCACAAGCTTTATCAATGGAGGAGGAGCAATACGGTGCCGTTTCGAAGCCGGTTGCNGTGATCACTTGCATAGCGATGGCCTTGCTCTACGTCGCCACCTTATACGCTCCCACCGTGCTCCTTCGTCTCCCACCTCCTACTTCTTTCACTAACTTCATGATTCGACGCTTCCTATGCGCCGTCGTTTCTACCACTCTCTCCCTCTCTCTATGTCCTCTCATCCTCCCCGTGCAAACCATGGAATTATGGTACANTTTTGGTGTTTACGGCATCCGTGTGGATCACATTTGGCAGGCCGTGGTCCTTCCTCTTTCCTTGACCTCTCTAATGTATGCTGGGTCTTTGGTCCTCAAGTCTCTTCTGTTGCTTGATTCTTGGAGGCAACACGCAGCTTTTGGTGGTGGCCTTTCCTTTGATTCTTGTAAATGTGCCTTGATGAGGTTTATTGGCTGGTTGTCTGCAGTTTCAACAAATGTTTTGGCTTGGCGAAACTATGTTGTGGCACCCCTTACAGAGGAGTTGGTGTTTAGGGCATGCATGATACCTTTACTTCTCTGTGGAGGATTTAAAACATACAGCGTNATGCTTCTTTGCCCCATTTTCTTCAGCTTGGCACATTTAAATCATTTTATGGAGATATACACCAAACAAAACTACAGAATAAAGAAGGCTGTTATGGTTATAGGGCTCCAGCTTGGCTACACTGTTATCTTTGGGTCCTATGCTGCTTTTCTTTTCATTCGAACTGGACATCTTGTAGCTCCATTAGTTGCTCATGTATATTGTAATTTTATGGGTCTGCCTGTGGTGTNTTCACAGGGAAGTGGGATTGTAAGTATAGCATTCATAATGGGATTCCTGGGCTTCTTGTGGCTTCTCTTCCCAATGACGGGACCAGATTTGTATAACGATAGAATGGATAATTGCAGTTGCTGGCAAGGGTACTGCTCATGGAGAAGTTAGAGAGAACAAAGAATNAATTCTGAAAGCAATAACTTTGATCCAATTTGGTGTCACTAGTTTTACTAGCTTATTGATGGTAAGTTTTAACAATTAACAACTATTTATGTAATACTTCCAACTGAAATAATTTCTTTTTATATCTTATATTTAAAATATTAACTTGAACTTTCAAATTATAGGGACAACTTGATGATATCACAACAATGACCTAGTGAAAGATGTGAAGCAACACCTTGTTTTACAACTGTTGGATATATTGGACATGTTTCTTTTGGGGGGTATAGGCTGTAAAATGATGGATCGGTATTTTGACATGTTTATTGGACATGTTTTTTGGGTATAGGTTTTTTCTAGGTATGTAATGAAGTGACATATTGAGTTGTTGCAATTACAATTACAATTTTTGTTGTTAGGCTTTAAATCTTTGAGATTGATGTGTTTATGTCCTATACTAAGGACTAATTGTAAGTTTTAAATGTGTGAATTCATATCATTATGCATAATCTTCNTTATCATTTAGGTATAATTCATGAGAAGTCGATGGGTGCATTTTTTAGCTCTGGCTCCAAGGCTAGAGTCAAAGTCGATGGGTGCTCAAGATTTATGGAGTCTCATTTGACCCCACTATAACAATAGGAATTATTCAGAGTGTGCATCTTCAAAACTCGCTCNCGTCTTTCATCTCCTTGGCCTTGTCAAGAATGAATGGGAGATAAGAGTCCAACACTATTTCCTTGTGCTTCCATTTAAGGCAAGCTGCAAATCAAAGGTGAGGTATTGCATGATACTTTCCCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00507	14537	30554	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K08658	RCE1, FACE2	EC:3.4.22.-	Terpenoid backbone biosynthesis	map00900
			Terpenoid backbone biosynthesis	map00900
			Terpenoid backbone biosynthesis	map00900

Gene Ontology

cellular_component
GO:0016020 membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000507s00030433.1	PF02517.11	Abi	279	385	1.40E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.603
SRR1783600	control	8.451
SRR1783602	moderate drought stress	16.613
SRR1811619	moderate drought stress	16.592

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.851
DRR006520	Root Summer glycyrrhizin high producing strain	12.957
DRR006521	Root Winter glycyrrhizin high producing strain	21.621
DRR006522	Root Winter glycyrrhizin high producing strain	21.105
DRR006523	Root Summer glycyrrhizin low producing strain	6.656
DRR006524	Root Summer glycyrrhizin low producing strain	6.441
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.772
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.656

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.376
SRR2868004	Drought Stress (root)	12.016
SRR2967015	Control (root)	12.740

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.245
SRR9715740	Leaf	13.061
SRR9715741	Leaf	18.923
SRR9715739	Root	6.013
SRR9715742	Root	10.402
SRR9715743	Root	9.540

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.162
SRR8749028	MeJA induced 9h	15.387
SRR8749029	MeJA induced 9h	8.920
SRR8749030	Uninduced	9.497
SRR8749031	Uninduced	4.791
SRR8749032	Uninduced	5.912

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.410
SRR8400027	Control - Root	19.314