Gene detail information of Glyur000506s00021897 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30130.1 | 2.00E-119 | Protein of unknown function (DUF630 and DUF632) |
| NR | KHN17621.1 | 0 | hypothetical protein glysoja_005818 [Glycine soja] |
| trEMBL | tr|K7MK60|K7MK60_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G06810.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00506 | 97004 | 100478 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000506s00021897.1 | PF04783.7 | DUF630 | 1 | 59 | 2.70E-25 |
| Glyur000506s00021897.1 | PF04782.7 | DUF632 | 347 | 670 | 8.50E-98 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.034 |
| SRR1783600 | control | 3.072 |
| SRR1783602 | moderate drought stress | 1.351 |
| SRR1811619 | moderate drought stress | 1.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.848 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.833 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.362 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.366 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.656 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.270 |
| SRR2868004 | Drought Stress (root) | 2.159 |
| SRR2967015 | Control (root) | 3.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.137 |
| SRR9715740 | Leaf | 0.024 |
| SRR9715741 | Leaf | 0.294 |
| SRR9715739 | Root | 0.136 |
| SRR9715742 | Root | 1.161 |
| SRR9715743 | Root | 0.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.445 |
| SRR8749028 | MeJA induced 9h | 2.045 |
| SRR8749029 | MeJA induced 9h | 1.318 |
| SRR8749030 | Uninduced | 0.188 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.535 |
| SRR8400027 | Control - Root | 4.188 |