Gene detail

Gene detail information of Glyur000506s00021896

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G19080.1	2.00E-72	metaxin-related
NR	XP_003543782.1	3.03E-180	PREDICTED: mitochondrial outer membrane import complex protein METAXIN-like [Glycine max]
COG	YP_001516929.1	6.00E-09	glutathione S-transferase [Acaryochloris marina MBIC11017]
Swissprot	tr\|O64471\|MTX_ARATH	2.00E-88	Mitochondrial outer membrane import complex protein METAXIN
trEMBL	tr\|I1LVN3\|I1LVN3_SOYBN	1.00E-180	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G00660.1}

Sequence

Transcript Sequence

>Glyur000506s00021896.1
CCCCAAAAAACAAATTGCACTGCAAAAATAAGAGACAGTCCCATGAACCCTAAACATATGAGGAACTAACTTGTNCGTTCATCACGATAATCTTTGTCGATGCATGGCGGAAGTGAACACTCTAGTGGTGAGGAAGCCTTGCTTTGGCCTCCCAACCGGTTGCCCTCAATGCCTCTCTGCTTTCATCTATCTCAAGTTCGCTCAAATCCCTTTCCAATTGGACTTCCACTTGAACCACCCTCATTCTGACCAAATTCCTTACTTCGAGGTTGGTGACTATGTGGCGTATAATAATGAGAAGGAGGGGATCATTGAGTGCTTGAAGAAAGATGTTGGTGTGGTTGATTTAGACAGTGAGGTTTCTTCACTCCCTGATTGGATATCAATCAAAGCAATTCTCACCACATGGCTTGCTGATGCACTTGCCTATGAACTCTGGGTGGGGTGTGATGGTTCCTTTGCTTATAGTATCTATTATTCTGATCTTCCTTGGCCCATGGGGAAGGTTCTCTCTTGGAACAAAGCTCATTGGNTAAAGCTGAAACATGGGATAACTAACGACAATGCTCAAGTGAAGAAAGAAGAGATTTATGGGAGAGCAAACTCTGCTTATGATGTTCTGTCAAAATGGTTAGGGGAAAAGAACTACCTATTTGAGAACAGGCCATCAAGCTTGGATGCTATTTTTCTTGCACATGGACTTGTTGCCCTTCATGCTTTACCTGAATCTTCAATGGTGCGGATCAAATTTTCGGAACATGATAATTTAGTTAGATATGTGCAACGATGTAAGACAGAACTTATAGAAACTGGTACATCTCCTTCCTCTGGTCCACAACTTCATACAGATGCGTCATCATCAAGTTCCAGAAGTCAATCAACTTGGAGATCAAAGTCTAAGAGCAAACCCAAAAGGGAGAAAACAGAGGAGGAGAAAACCTTTAAAAGGAGGGCCAAATATTTTGTGGTAGCACAGNTGGTTGCGGTTGTTGTTTTCCTCACGCGTATGGCTACATTTGATGATGCTGAGTTGGAGCTAGATGATGGTGATGGAGGTTATGATTACAGTGATTAAAAATGCACTGATTTGTTTATCTACCTCTCCTACACTTTTTTTTTACTATGCAATTGAAAATGGGAAAATTACCATCCATGATCAATTTTTTGTATACACTGGTTGAAGTTGATTCATACAGGTTCATCATTAGAATATGTTGCTTTTTTACTTGAGTTGTAAGAAATGAACCAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00506	90908	93235	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006626 protein targeting to mitochondrion

cellular_component
GO:0005741 mitochondrial outer membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.051
SRR1783600	control	12.984
SRR1783602	moderate drought stress	6.466
SRR1811619	moderate drought stress	6.533

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	19.428
DRR006520	Root Summer glycyrrhizin high producing strain	19.483
DRR006521	Root Winter glycyrrhizin high producing strain	12.166
DRR006522	Root Winter glycyrrhizin high producing strain	11.624
DRR006523	Root Summer glycyrrhizin low producing strain	13.352
DRR006524	Root Summer glycyrrhizin low producing strain	12.794
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.429
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.291

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	29.982
SRR2868004	Drought Stress (root)	20.989
SRR2967015	Control (root)	17.417

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.122
SRR9715740	Leaf	13.993
SRR9715741	Leaf	9.811
SRR9715739	Root	2.557
SRR9715742	Root	6.696
SRR9715743	Root	5.611

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	37.373
SRR8749028	MeJA induced 9h	18.949
SRR8749029	MeJA induced 9h	15.705
SRR8749030	Uninduced	7.103
SRR8749031	Uninduced	2.068
SRR8749032	Uninduced	3.579

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.615
SRR8400027	Control - Root	20.744