Gene detail information of Glyur000506s00021885 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57345.1 | 9.00E-20 | |
| NR | NP_001235783.1 | 4.69E-84 | uncharacterized protein LOC100500282 [Glycine max] |
| trEMBL | tr|C6T189|C6T189_SOYBN | 2.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00506 | 22616 | 24692 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000506s00021885.1 | PF07466.6 | DUF1517 | 81 | 185 | 3.80E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.758 |
| SRR1783600 | control | 9.935 |
| SRR1783602 | moderate drought stress | 11.380 |
| SRR1811619 | moderate drought stress | 11.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.703 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.423 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.176 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.643 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.915 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.800 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 170.226 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 169.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.169 |
| SRR2868004 | Drought Stress (root) | 21.213 |
| SRR2967015 | Control (root) | 21.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 147.776 |
| SRR9715740 | Leaf | 265.257 |
| SRR9715741 | Leaf | 130.464 |
| SRR9715739 | Root | 5.645 |
| SRR9715742 | Root | 6.108 |
| SRR9715743 | Root | 6.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.072 |
| SRR8749028 | MeJA induced 9h | 6.237 |
| SRR8749029 | MeJA induced 9h | 6.900 |
| SRR8749030 | Uninduced | 4.870 |
| SRR8749031 | Uninduced | 3.124 |
| SRR8749032 | Uninduced | 3.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.418 |
| SRR8400027 | Control - Root | 11.657 |